RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 NELFBQ8WX92 580 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 LZTS2Q9BRK4 669 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 GDF11O95390 407 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 CERKLQ49MI3 558 aaPredicted RBP14.09□□□□□ -0.15
CDX2-201ENST00000381020 CSGALNACT2Q8N6G5 542 aa14.09□□□□□ -0.15
CDX2-201ENST00000381020 RIOK1Q9BRS2 568 aaKnown RBP14.09□□□□□ -0.15
CDX2-201ENST00000381020 AKR1B15C9JRZ8 316 aaPredicted RBP14.08□□□□□ -0.16
CDX2-201ENST00000381020 RESP18Q5W5W9 173 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 GOLGA6L1Q8N7Z2 621 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 JDP2Q8WYK2 163 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 TIGD1Q96MW7 591 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 CEP89Q96ST8 783 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 DESI2Q9BSY9 194 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 SEPT11Q9NVA2 429 aaKnown RBP14.08□□□□□ -0.16
CDX2-201ENST00000381020 PCDHA4Q9UN74 947 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
CDX2-201ENST00000381020 ARID5AQ03989 594 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 C12orf60Q5U649 245 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 ADAMTSL3P82987 1691 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 NEK8Q86SG6 692 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 TBC1D16Q8TBP0 767 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.08□□□□□ -0.16
CDX2-201ENST00000381020 RIC1Q4ADV7 1423 aa14.08□□□□□ -0.16
CDX2-201ENST00000381020 CHMP2AO43633 222 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 RAD17O75943 681 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 ADRA2BP18089 450 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 IL17RAQ96F46 866 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 PDCL3Q9H2J4 239 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 STK36Q9NRP7 1315 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 CCDC175P0C221 793 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 TBC1D8BQ0IIM8 1120 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 SPECC1LQ69YQ0 1117 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 VIRMAQ69YN4 1812 aaKnown RBP14.07□□□□□ -0.16
CDX2-201ENST00000381020 USP17L5A8MUK1 530 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 AKR1B10O60218 316 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 CFBP00751 764 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 SLFN14P0C7P3 912 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 TBCKQ8TEA7 893 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 DRC1Q96MC2 740 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 SRRTQ9BXP5 876 aaKnown RBP14.07□□□□□ -0.16
CDX2-201ENST00000381020 IMPACTQ9P2X3 320 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 MROH7-TTC4A0A0A0MT08 1334 aa14.07□□□□□ -0.16
CDX2-201ENST00000381020 FGFR1OPO95684 399 aaKnown RBP14.06□□□□□ -0.16
CDX2-201ENST00000381020 OR52Z1P0C646 297 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 GPS2Q13227 327 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 CPXCR1Q8N123 301 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDX2-201ENST00000381020 PSTPIP2Q9H939 334 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 GJA3Q9Y6H8 435 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 U2AF2P26368 475 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDX2-201ENST00000381020 DLGAP5Q15398 846 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 MYRIPQ8NFW9 859 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 LUC7L2Q9Y383 392 aaKnown RBP14.06□□□□□ -0.16
CDX2-201ENST00000381020 MRC1P22897 1456 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 KRT9P35527 623 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 ICA1Q05084 483 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 AXDND1Q5T1B0 1012 aaPredicted RBP14.06□□□□□ -0.16
CDX2-201ENST00000381020 FAM114A1Q8IWE2 563 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 GUCA1BQ9UMX6 200 aa14.06□□□□□ -0.16
CDX2-201ENST00000381020 PP2D1A8MPX8 630 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 AP5Z1O43299 807 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 SLU7O95391 586 aaKnown RBP14.05□□□□□ -0.16
CDX2-201ENST00000381020 SNAP25P60880 206 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 EVX2Q03828 476 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 PFKFB3Q16875 520 aaPredicted RBP14.05□□□□□ -0.16
CDX2-201ENST00000381020 SLC10A5Q5PT55 438 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 SLFN13Q68D06 897 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 ENGASEQ8NFI3 743 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 CERKQ8TCT0 537 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 COA1Q9GZY4 146 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 ZBTB21Q9ULJ3 1066 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 PCDHA1Q9Y5I3 950 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 TRAF5O00463 557 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 NPR1P16066 1061 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 TROAPQ12815 778 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 IQCB1Q15051 598 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 NTRK3Q16288 839 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 CCDC181Q5TID7 509 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 CCDC174Q6PII3 467 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 ILDR1Q86SU0 546 aaPredicted RBP14.05□□□□□ -0.16
CDX2-201ENST00000381020 ERMNQ8TAM6 284 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 RGPD5Q99666 1765 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 C21orf2O43822 256 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 TBCAO75347 108 aaKnown RBP14.05□□□□□ -0.16
CDX2-201ENST00000381020 GYS1P13807 737 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 RXRBP28702 533 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 UBE2SQ16763 222 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 FLAD1Q8NFF5 587 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 ORC4O43929 436 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 ZNF569Q5MCW4 686 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 TMCO3Q6UWJ1 677 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 METTL16Q86W50 562 aaKnown RBP14.05□□□□□ -0.16
CDX2-201ENST00000381020 PAGE5Q96GU1 130 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 BCL2L12Q9HB09 334 aa14.05□□□□□ -0.16
CDX2-201ENST00000381020 TTLL1O95922 423 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 CHRNA5P30532 468 aa14.04□□□□□ -0.16
CDX2-201ENST00000381020 PLS1Q14651 629 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms