RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 ATP2C1P98194 919 aaPredicted RBP22.02■■□□□ 1.12
GMDS-201ENST00000380805 DPCR1Q3MIW9 517 aa22.02■■□□□ 1.12
GMDS-201ENST00000380805 LONRF3Q496Y0 759 aa22.02■■□□□ 1.12
GMDS-201ENST00000380805 TTC38Q5R3I4 469 aa22.02■■□□□ 1.12
GMDS-201ENST00000380805 METTL16Q86W50 562 aaKnown RBP22.02■■□□□ 1.12
GMDS-201ENST00000380805 CCDC148Q8NFR7 591 aa22.02■■□□□ 1.12
GMDS-201ENST00000380805 SERPINB13Q9UIV8 391 aa22.02■■□□□ 1.12
GMDS-201ENST00000380805 UTRNP46939 3433 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 ECE2O60344 883 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 PLCB2Q00722 1185 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 MDM2Q00987 491 aaPredicted RBP22.01■■□□□ 1.11
GMDS-201ENST00000380805 KIAA2012Q0VF49 1180 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 PICALMQ13492 652 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 BLIDQ8IZY5 108 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 BARHL2Q9NY43 387 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 MTMR4Q9NYA4 1195 aa22.01■■□□□ 1.11
GMDS-201ENST00000380805 GOLGA6L6A8MZA4 724 aa22■■□□□ 1.11
GMDS-201ENST00000380805 PARP1P09874 1014 aaKnown RBP22■■□□□ 1.11
GMDS-201ENST00000380805 SCNN1DP51172 638 aa22■■□□□ 1.11
GMDS-201ENST00000380805 ZRSR1Q15695 479 aaKnown RBP22■■□□□ 1.11
GMDS-201ENST00000380805 KLRF2D3W0D1 207 aa22■■□□□ 1.11
GMDS-201ENST00000380805 STXBP3O00186 592 aa22■■□□□ 1.11
GMDS-201ENST00000380805 WNT7AO00755 349 aa22■■□□□ 1.11
GMDS-201ENST00000380805 SNHG28P0DPA3 235 aa22■■□□□ 1.11
GMDS-201ENST00000380805 NOM1Q5C9Z4 860 aaKnown RBP22■■□□□ 1.11
GMDS-201ENST00000380805 NT5DC1Q5TFE4 455 aa22■■□□□ 1.11
GMDS-201ENST00000380805 WWC2Q6AWC2 1192 aa22■■□□□ 1.11
GMDS-201ENST00000380805 TYW1BQ6NUM6 668 aa22■■□□□ 1.11
GMDS-201ENST00000380805 CNNM3Q8NE01 707 aa22■■□□□ 1.11
GMDS-201ENST00000380805 SUPT20HQ8NEM7 779 aa22■■□□□ 1.11
GMDS-201ENST00000380805 MRFAP1L1Q96HT8 127 aa22■■□□□ 1.11
GMDS-201ENST00000380805 IDI2Q9BXS1 227 aa22■■□□□ 1.11
GMDS-201ENST00000380805 CSRNP2Q9H175 543 aa22■■□□□ 1.11
GMDS-201ENST00000380805 HOOK1Q9UJC3 728 aaKnown RBP22■■□□□ 1.11
GMDS-201ENST00000380805 MYH4Q9Y623 1939 aa21.99■■□□□ 1.11
GMDS-201ENST00000380805 A0A087WWV3 80 aa21.99■■□□□ 1.11
GMDS-201ENST00000380805 BECN2A8MW95 431 aa21.99■■□□□ 1.11
GMDS-201ENST00000380805 SHMT1P34896 483 aa21.99■■□□□ 1.11
GMDS-201ENST00000380805 KCNQ5Q9NR82 932 aa21.99■■□□□ 1.11
GMDS-201ENST00000380805 ACTN4O43707 911 aaKnown RBP21.98■■□□□ 1.11
GMDS-201ENST00000380805 KANK3Q6NY19 840 aa21.98■■□□□ 1.11
GMDS-201ENST00000380805 PIK3AP1Q6ZUJ8 805 aa21.98■■□□□ 1.11
GMDS-201ENST00000380805 GPKOWQ92917 476 aaPredicted RBP eCLIP21.98■■□□□ 1.11
GMDS-201ENST00000380805 TRIM5Q9C035 493 aa21.98■■□□□ 1.11
GMDS-201ENST00000380805 SERPINA10Q9UK55 444 aa21.98■■□□□ 1.11
GMDS-201ENST00000380805 COL2A1P02458 1487 aaPredicted RBP21.98■■□□□ 1.11
GMDS-201ENST00000380805 IKBKBO14920 756 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 HLA-DOAP06340 250 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 AKR1B1P15121 316 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 ATP2B1P20020 1258 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 PNOCQ13519 176 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 AOPEPQ8N6M6 819 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 DHX36Q9H2U1 1008 aaKnown RBP21.97■■□□□ 1.11
GMDS-201ENST00000380805 RIOX1Q9H6W3 641 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 PIM2Q9P1W9 311 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 BRCA1P38398 1863 aaKnown RBP21.97■■□□□ 1.11
GMDS-201ENST00000380805 hCG_1984214I3L0E3 225 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 ADAMTS3O15072 1205 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 PDHBP11177 359 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 SPECC1Q5M775 1068 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 ARL6IP4Q66PJ3 421 aaKnown RBP21.97■■□□□ 1.11
GMDS-201ENST00000380805 FOXP4Q8IVH2 680 aaPredicted RBP21.97■■□□□ 1.11
GMDS-201ENST00000380805 ZNF713Q8N859 430 aaPredicted RBP21.97■■□□□ 1.11
GMDS-201ENST00000380805 ZMYND12Q9H0C1 365 aa21.97■■□□□ 1.11
GMDS-201ENST00000380805 POLR2DO15514 142 aaKnown RBP21.96■■□□□ 1.11
GMDS-201ENST00000380805 SARSP49591 514 aaKnown RBP21.96■■□□□ 1.11
GMDS-201ENST00000380805 NFIAQ12857 509 aa21.96■■□□□ 1.11
GMDS-201ENST00000380805 ASPRV1Q53RT3 343 aa21.96■■□□□ 1.11
GMDS-201ENST00000380805 PPP4R3BQ5MIZ7 849 aa21.96■■□□□ 1.11
GMDS-201ENST00000380805 TTLL6Q8N841 843 aa21.96■■□□□ 1.11
GMDS-201ENST00000380805 SPATA20Q8TB22 786 aa21.96■■□□□ 1.11
GMDS-201ENST00000380805 CCDC12Q8WUD4 166 aaPredicted RBP21.96■■□□□ 1.11
GMDS-201ENST00000380805 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
GMDS-201ENST00000380805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.95■■□□□ 1.1
GMDS-201ENST00000380805 ESYT2A0FGR8 921 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 TTLL1O95922 423 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 PTGDRQ13258 359 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 NCAPHQ15003 741 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 POSTNQ15063 836 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 ZNF174Q15697 407 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 PIBF1Q8WXW3 757 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 CCDC17Q96LX7 622 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 PCDHA6Q9UN73 950 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 PCDHA8Q9Y5H6 950 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 PCDHA5Q9Y5H7 936 aa21.95■■□□□ 1.1
GMDS-201ENST00000380805 GOLGA8HP0CJ92 632 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 USP17L2Q6R6M4 530 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 USP49Q70CQ1 688 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 RASGRP2Q7LDG7 609 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 HEATR3Q7Z4Q2 680 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 KIAA0825Q8IV33 1275 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 C4orf32Q8N8J7 132 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 TRIML1Q8N9V2 468 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 RRP36Q96EU6 259 aaKnown RBP21.94■■□□□ 1.1
GMDS-201ENST00000380805 SERTAD1Q9UHV2 236 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 ATRNL1Q5VV63 1379 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 SMTNL1A8MU46 457 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 BIN1O00499 593 aa21.94■■□□□ 1.1
GMDS-201ENST00000380805 AOC3Q16853 763 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms