RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 ZNF500O60304 480 aaPredicted RBP13.72□□□□□ -0.21
USP3-202ENST00000380324 KIAA2012Q0VF49 1180 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 PTGDRQ13258 359 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 GRAMD1CQ8IYS0 662 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 EPSTI1Q96J88 318 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 SERTAD1Q9UHV2 236 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 PCDHA4Q9UN74 947 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 PLIN4Q96Q06 1357 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 SIPA1L1O43166 1804 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 USP17L5A8MUK1 530 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 MPHOSPH10O00566 681 aaKnown RBP13.72□□□□□ -0.21
USP3-202ENST00000380324 PTGS1P23219 599 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 DACT2Q5SW24 774 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 STRIP1Q5VSL9 837 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 ZNF579Q8NAF0 562 aaKnown RBP13.72□□□□□ -0.21
USP3-202ENST00000380324 SYMPKQ92797 1274 aaKnown RBP13.72□□□□□ -0.21
USP3-202ENST00000380324 KCNF1Q9H3M0 494 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 TUBE1Q9UJT0 475 aa13.72□□□□□ -0.21
USP3-202ENST00000380324 FAM196BA6NMK8 535 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 STXBP3O00186 592 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 C21orf2O43822 256 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 HLA-DOAP06340 250 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 PRR29P0C7W0 189 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 POSTNQ15063 836 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 ZFPM1Q8IX07 1006 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 CCDC148Q8NFR7 591 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 DHX58Q96C10 678 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 SH3GLB2Q9NR46 395 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 BARHL2Q9NY43 387 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 MTMR4Q9NYA4 1195 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 CLIP2Q9UDT6 1046 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 PCDHA5Q9Y5H7 936 aa13.71□□□□□ -0.21
USP3-202ENST00000380324 A0A087X0B3 334 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 BMP15O95972 392 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 PDHBP11177 359 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 SHMT1P34896 483 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 NAPAP54920 295 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 ATP2C1P98194 919 aaPredicted RBP13.7□□□□□ -0.22
USP3-202ENST00000380324 ATP2B2Q01814 1243 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 SARM1Q6SZW1 724 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 FOXP4Q8IVH2 680 aaPredicted RBP13.7□□□□□ -0.22
USP3-202ENST00000380324 C17orf53Q8N3J3 647 aaPredicted RBP13.7□□□□□ -0.22
USP3-202ENST00000380324 ZDHHC15Q96MV8 337 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 SPZ1Q9BXG8 430 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 SEC63Q9UGP8 760 aaKnown RBP13.7□□□□□ -0.22
USP3-202ENST00000380324 CCDC194A0A1B0GVG4 234 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 PPIP5K2O43314 1243 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 FERMT2Q96AC1 680 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 LZTS2Q9BRK4 669 aa13.7□□□□□ -0.22
USP3-202ENST00000380324 HOOK1Q9UJC3 728 aaKnown RBP13.7□□□□□ -0.22
USP3-202ENST00000380324 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
USP3-202ENST00000380324 TRAPPC10P48553 1259 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 CCDC186Q7Z3E2 898 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.69□□□□□ -0.22
USP3-202ENST00000380324 ZSCAN29Q8IWY8 852 aaPredicted RBP13.69□□□□□ -0.22
USP3-202ENST00000380324 RRP36Q96EU6 259 aaKnown RBP13.69□□□□□ -0.22
USP3-202ENST00000380324 NAP1L5Q96NT1 182 aaPredicted RBP13.69□□□□□ -0.22
USP3-202ENST00000380324 PIGSQ96S52 555 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 BPIFA3Q9BQP9 254 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 SWAP70Q9UH65 585 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 GREB1LQ9C091 1923 aaPredicted RBP13.69□□□□□ -0.22
USP3-202ENST00000380324 INF2Q27J81 1249 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 PCDHA6Q9UN73 950 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 PCDHA8Q9Y5H6 950 aa13.69□□□□□ -0.22
USP3-202ENST00000380324 TTLL1O95922 423 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 MDM2Q00987 491 aaPredicted RBP13.68□□□□□ -0.22
USP3-202ENST00000380324 SHROOM1Q2M3G4 852 aaPredicted RBP13.68□□□□□ -0.22
USP3-202ENST00000380324 DNAJC18Q9H819 358 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 GPCPD1Q9NPB8 672 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
USP3-202ENST00000380324 M0R2N6 131 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 RAD21O60216 631 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 LMOD1P29536 600 aaPredicted RBP13.68□□□□□ -0.22
USP3-202ENST00000380324 AFMP43652 599 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 NOVP48745 357 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 SMARCE1Q969G3 411 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 PYCARDQ9ULZ3 195 aa13.68□□□□□ -0.22
USP3-202ENST00000380324 C10orf71Q711Q0 1435 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 IGKV6D-41A0A0C4DH26 115 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 YDJCA8MPS7 323 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 SMC2O95347 1197 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 BMP6P22004 513 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 CASP1P29466 404 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 LRMPQ12912 555 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 SF3B2Q13435 895 aaKnown RBP13.67□□□□□ -0.22
USP3-202ENST00000380324 NCAPHQ15003 741 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 CCDC144BQ3MJ40 725 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 MRFAP1L1Q96HT8 127 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 MAN1B1Q9UKM7 699 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 MORC2Q9Y6X9 1032 aaPredicted RBP13.67□□□□□ -0.22
USP3-202ENST00000380324 PSME4Q14997 1843 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 TPM3P06753 285 aa13.67□□□□□ -0.22
USP3-202ENST00000380324 CDC25BP30305 580 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms