RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 H3BQV1 296 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 RESTQ13127 1097 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 NFKBIBQ15653 356 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 IFFO2Q5TF58 517 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 DCAF4Q8WV16 495 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 GBP4Q96PP9 640 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 TMX2Q9Y320 296 aa13.9□□□□□ -0.19
EXOSC9-202ENST00000379663 SUPT20HL1Q3ZLR7 823 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 PRAMEF18Q5VWM3 479 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 PNMA8AQ86V59 439 aaPredicted RBP13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 SULF1Q8IWU6 871 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 SHISA4Q96DD7 197 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 KLRG1Q96E93 195 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 GMCL1Q96IK5 515 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 RIOX1Q9H6W3 641 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 ARHGEF10LQ9HCE6 1279 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 GJB4Q9NTQ9 266 aa13.89□□□□□ -0.19
EXOSC9-202ENST00000379663 ADM5C9JUS6 153 aa13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 GOLGA8HP0CJ92 632 aa13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 ECE1P42892 770 aa13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 PFKFB3Q16875 520 aaPredicted RBP13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 FOXD4L5Q5VV16 416 aaPredicted RBP13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 FOXD4L4Q8WXT5 416 aaPredicted RBP13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 ZSCAN16Q9H4T2 348 aaPredicted RBP13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 ATP6V1DQ9Y5K8 247 aa13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 V9GY48 417 aaPredicted RBP13.88□□□□□ -0.19
EXOSC9-202ENST00000379663 F5H6K3 240 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 NDUFB10O96000 172 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 SCG2P13521 617 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 PRKAR2AP13861 404 aaKnown RBP13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 INPP5BP32019 993 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 MCM4P33991 863 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 AKAP17AQ02040 695 aaKnown RBP13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 KLRC3Q07444 240 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 NOL9Q5SY16 702 aaKnown RBP13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 KRT40Q6A162 431 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 KRT26Q7Z3Y9 468 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 FERMT3Q86UX7 667 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 SCYL3Q8IZE3 742 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 SH2D4AQ9H788 454 aa13.87□□□□□ -0.19
EXOSC9-202ENST00000379663 MMP1P03956 469 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 KIF23Q02241 960 aaPredicted RBP13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 SLFN13Q68D06 897 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 OTUD7BQ6GQQ9 843 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 FAM177A1Q8N128 213 aaPredicted RBP13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 MTMR8Q96EF0 704 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 WRNIP1Q96S55 665 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 CPVLQ9H3G5 476 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 FRMPD2Q68DX3 1309 aaPredicted RBP13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 MYH7BA7E2Y1 1941 aa13.86□□□□□ -0.19
EXOSC9-202ENST00000379663 A0A0G2JMZ2 1700 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 hCG_1642624A0A1W2PR95 340 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 USP2O75604 605 aaPredicted RBP13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 SLC1A4P43007 532 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 FOSBP53539 338 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 KIAA1755Q5JYT7 1200 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 USP48Q86UV5 1035 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 CHAMP1Q96JM3 812 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 PHF20Q9BVI0 1012 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 GLIS2Q9BZE0 524 aaPredicted RBP13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 VCPKMTQ9H867 229 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 GOPCQ9HD26 462 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 SH3GLB2Q9NR46 395 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 FZD1Q9UP38 647 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 DDX11L8A8MPP1 907 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 KIF28PB7ZC32 967 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 VEGFAP15692 232 aaPredicted RBP13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 U2AF2P26368 475 aaKnown RBP eCLIP13.85□□□□□ -0.193e-10■■■■■ 44.2
EXOSC9-202ENST00000379663 TRIM29Q14134 588 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 NPY5RQ15761 445 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 BTNL9Q6UXG8 535 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 DLK2Q6UY11 383 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 KCTD1Q719H9 257 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 CDCA5Q96FF9 252 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 KIAA1683Q9H0B3 1180 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 VPS54Q9P1Q0 977 aa13.85□□□□□ -0.19
EXOSC9-202ENST00000379663 hCG_1984214I3L0E3 225 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 BMP3P12645 472 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 XBP1P17861 261 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 PTPRAP18433 802 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 MAP3K11Q16584 847 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 CCDC96Q2M329 555 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 TTBK2Q6IQ55 1244 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 BRAPQ7Z569 592 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 CCDC84Q86UT8 332 aaPredicted RBP13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 ADGRF4Q8IZF3 695 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 ZNF713Q8N859 430 aaPredicted RBP13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 TMEM87AQ8NBN3 555 aa13.84□□□□□ -0.19
EXOSC9-202ENST00000379663 ZKSCAN4Q969J2 545 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms