RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NLRP5P59047 1200 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 CNTNAP1P78357 1384 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 SLC51AQ86UW1 340 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 TRIML1Q8N9V2 468 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 SPC24Q8NBT2 197 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 SNED1Q8TER0 1413 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 SHISA4Q96DD7 197 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 MASTLQ96GX5 879 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 PLIN4Q96Q06 1357 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 PYM1Q9BRP8 204 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 ZC3H12CQ9C0D7 883 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 TTC12Q9H892 705 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
POLR2J3-201ENST00000379340 TPM2P07951 284 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 VEGFBP49765 207 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 LBX1P52954 281 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 NPY5RQ15761 445 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 DPCR1Q3MIW9 517 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 TTC38Q5R3I4 469 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 OLFM4Q6UX06 510 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 SPTLC3Q9NUV7 552 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 DACH1Q9UI36 760 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 DAGLAQ9Y4D2 1042 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 MYH8P13535 1937 aa11.96□□□□□ -0.49
POLR2J3-201ENST00000379340 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 DDNO94850 711 aaPredicted RBP11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 NOVP48745 357 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 PLCD1P51178 756 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 GTF2IP78347 998 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 NOLC1Q14978 699 aaKnown RBP eCLIP11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 LONRF3Q496Y0 759 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 CT47A1Q5JQC4 288 aaPredicted RBP11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 NT5DC1Q5TFE4 455 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 DPP8Q6V1X1 898 aaPredicted RBP11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 METTL16Q86W50 562 aaKnown RBP11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 KIAA1524Q8TCG1 905 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 CCDC12Q8WUD4 166 aaPredicted RBP11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 TMEM47Q9BQJ4 181 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 SPZ1Q9BXG8 430 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 MAD2L2Q9UI95 211 aa11.96□□□□□ -0.5
POLR2J3-201ENST00000379340 PASKQ96RG2 1323 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 TOP1P11387 765 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 GSDMDP57764 484 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 FKBP1AP62942 108 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 ATP2C1P98194 919 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 POSTNQ15063 836 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 HHIPL2Q6UWX4 724 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 CCDC186Q7Z3E2 898 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 BLIDQ8IZY5 108 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 ERCC4Q92889 916 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 ABHD8Q96I13 439 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 ZNF830Q96NB3 372 aaPredicted RBP11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 CSRNP2Q9H175 543 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 KCNF1Q9H3M0 494 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 SWAP70Q9UH65 585 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 SAP30BPQ9UHR5 308 aaKnown RBP11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 PCDHA4Q9UN74 947 aa11.95□□□□□ -0.5
POLR2J3-201ENST00000379340 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 USP17L3A6NCW0 530 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 USP17L4A6NCW7 530 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 hCG_1984214I3L0E3 225 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 C21orf2O43822 256 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 PTGS1P23219 599 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 CTCFP49711 727 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 MYL5Q02045 173 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 PNOCQ13519 176 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 ARL6IP4Q66PJ3 421 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 STYK1Q6J9G0 422 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 DPY19L2Q6NUT2 758 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 USP17L1Q7RTZ2 530 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 ZNF713Q8N859 430 aaPredicted RBP11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 WBP1LQ9NX94 342 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 STX8Q9UNK0 236 aa11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 DICER1Q9UPY3 1922 aaKnown RBP11.94□□□□□ -0.5
POLR2J3-201ENST00000379340 FER1L6Q2WGJ9 1857 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 G3V3G9 751 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 BIN1O00499 593 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 RIMBP2O15034 1052 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 CBFA2T2O43439 604 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 ACTN4O43707 911 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 SMC2O95347 1197 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 PARP1P09874 1014 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 ATP2B1P20020 1258 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 NCAPHQ15003 741 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 SLC4A8Q2Y0W8 1093 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 PODNQ7Z5L7 613 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 MLKLQ8NB16 471 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 SMARCE1Q969G3 411 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 MRIQ9BWK5 157 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 BARHL2Q9NY43 387 aa11.93□□□□□ -0.5
POLR2J3-201ENST00000379340 SERTAD1Q9UHV2 236 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms