RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 KIAA1755Q5JYT7 1200 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 CTU1Q7Z7A3 348 aaKnown RBP17.03■□□□□ 0.32
UBE4B-203ENST00000377153 MB21D1Q8N884 522 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 CD99L2Q8TCZ2 262 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 SLF1Q9BQI6 1058 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 TMEM47Q9BQJ4 181 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 CWC22Q9HCG8 908 aaKnown RBP17.03■□□□□ 0.32
UBE4B-203ENST00000377153 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
UBE4B-203ENST00000377153 CTDP1Q9Y5B0 961 aaPredicted RBP17.03■□□□□ 0.32
UBE4B-203ENST00000377153 GNRH1P01148 92 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 MCM5P33992 734 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 NOVP48745 357 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 STAT2P52630 851 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
UBE4B-203ENST00000377153 LBX2Q6XYB7 198 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 STOX1Q6ZVD7 989 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 ENAHQ8N8S7 591 aaPredicted RBP17.02■□□□□ 0.32
UBE4B-203ENST00000377153 GPRC5AQ8NFJ5 357 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 DCAF4Q8WV16 495 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 NUP88Q99567 741 aaPredicted RBP17.02■□□□□ 0.32
UBE4B-203ENST00000377153 MORF4L1Q9UBU8 362 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 RABGAP1Q9Y3P9 1069 aa17.02■□□□□ 0.32
UBE4B-203ENST00000377153 PLXNB2O15031 1838 aa17.01■□□□□ 0.31
UBE4B-203ENST00000377153 IFIT3O14879 490 aaKnown RBP17.01■□□□□ 0.31
UBE4B-203ENST00000377153 RCSD1Q6JBY9 416 aa17.01■□□□□ 0.31
UBE4B-203ENST00000377153 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
UBE4B-203ENST00000377153 EFCC1Q9HA90 598 aa17.01■□□□□ 0.31
UBE4B-203ENST00000377153 FEM1BQ9UK73 627 aa17.01■□□□□ 0.31
UBE4B-203ENST00000377153 TAF6LQ9Y6J9 622 aa17.01■□□□□ 0.31
UBE4B-203ENST00000377153 TNPO2O14787 897 aaKnown RBP17■□□□□ 0.31
UBE4B-203ENST00000377153 FMNL1O95466 1100 aaPredicted RBP17■□□□□ 0.31
UBE4B-203ENST00000377153 HMGB1P09429 215 aaKnown RBP17■□□□□ 0.31
UBE4B-203ENST00000377153 DSG3P32926 999 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 HSPA4P34932 840 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 ERVK-9P63128 1117 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 ERVK-24P63145 666 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 WTAPQ15007 396 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 TMEM67Q5HYA8 995 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 FAM160B2Q86V87 743 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 MB21D2Q8IYB1 491 aaPredicted RBP17■□□□□ 0.31
UBE4B-203ENST00000377153 PRPF38AQ8NAV1 312 aaKnown RBP17■□□□□ 0.31
UBE4B-203ENST00000377153 PPP1R9AQ9ULJ8 1098 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 TRIM17Q9Y577 477 aa17■□□□□ 0.31
UBE4B-203ENST00000377153 TMEM232C9JQI7 657 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 PRC1O43663 620 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 ECM2O94769 699 aaPredicted RBP16.99■□□□□ 0.31
UBE4B-203ENST00000377153 HOXD10P28358 340 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 PSMC4P43686 418 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
UBE4B-203ENST00000377153 CHURC1Q8WUH1 139 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 KIFC2Q96AC6 838 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 COA7Q96BR5 231 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 CHMP4CQ96CF2 233 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 ATG4CQ96DT6 458 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 NEK1Q96PY6 1258 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 MTA3Q9BTC8 594 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 MYH6P13533 1939 aa16.99■□□□□ 0.31
UBE4B-203ENST00000377153 PDHBP11177 359 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 MAPK4P31152 587 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 PLS1Q14651 629 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 TSGA10IPQ3SY00 556 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 GPATCH4Q5T3I0 446 aaKnown RBP16.98■□□□□ 0.31
UBE4B-203ENST00000377153 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 KCTD1Q719H9 257 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 NKX2-3Q8TAU0 364 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 ANKS1AQ92625 1134 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 TMEM87BQ96K49 555 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 TXNRD2Q9NNW7 524 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 FBXO28Q9NVF7 368 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 RBPJLQ9UBG7 517 aa16.98■□□□□ 0.31
UBE4B-203ENST00000377153 WDR19Q8NEZ3 1342 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 VWA5AO00534 786 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 ZBED4O75132 1171 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 FDX1P10109 184 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 PSMA5P28066 241 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 PRMT2P55345 433 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 FGD1P98174 961 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 SEC23AQ15436 765 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 COL13A1Q5TAT6 717 aaPredicted RBP16.97■□□□□ 0.31
UBE4B-203ENST00000377153 NFXL1Q6ZNB6 911 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 OTOP1Q7RTM1 612 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 ARHGAP39Q9C0H5 1083 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 IVNS1ABPQ9Y6Y0 642 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 ZNF236Q9UL36 1845 aa16.97■□□□□ 0.31
UBE4B-203ENST00000377153 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.31
UBE4B-203ENST00000377153 PLA2G6O60733 806 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
UBE4B-203ENST00000377153 COPB2P35606 906 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 RASGRP2Q7LDG7 609 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 CATIPQ7Z7H3 387 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 TNS4Q8IZW8 715 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 TMTC2Q8N394 836 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 TRIM47Q96LD4 638 aa16.96■□□□□ 0.31
UBE4B-203ENST00000377153 JAKMIP1Q96N16 626 aaKnown RBP16.96■□□□□ 0.31
UBE4B-203ENST00000377153 SPATC1LQ9H0A9 340 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms