RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 DYNC1I1O14576 645 aa23.04■■□□□ 1.28
VSX1-202ENST00000376709 SARSP49591 514 aaKnown RBP23.04■■□□□ 1.28
VSX1-202ENST00000376709 TRIML1Q8N9V2 468 aa23.04■■□□□ 1.28
VSX1-202ENST00000376709 MLKLQ8NB16 471 aa23.04■■□□□ 1.28
VSX1-202ENST00000376709 C16orf45Q96MC5 204 aaPredicted RBP23.04■■□□□ 1.28
VSX1-202ENST00000376709 PCDHA4Q9UN74 947 aa23.04■■□□□ 1.28
VSX1-202ENST00000376709 SNED1Q8TER0 1413 aa23.04■■□□□ 1.28
VSX1-202ENST00000376709 A0A087X0B3 334 aa23.04■■□□□ 1.28
VSX1-202ENST00000376709 HSP90AA2PQ14568 343 aaPredicted RBP23.04■■□□□ 1.28
VSX1-202ENST00000376709 ZNF622Q969S3 477 aaKnown RBP eCLIP23.04■■□□□ 1.28
VSX1-202ENST00000376709 ZC3H12CQ9C0D7 883 aaKnown RBP23.04■■□□□ 1.28
VSX1-202ENST00000376709 FANCLQ9NW38 375 aa23.04■■□□□ 1.28
VSX1-202ENST00000376709 ADAMTS3O15072 1205 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 CBFA2T2O43439 604 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 MYO1BO43795 1136 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 SLFN14P0C7P3 912 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 UBASH3AP57075 661 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 MORC3Q14149 939 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 DAGLAQ9Y4D2 1042 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 RRP9O43818 475 aaKnown RBP23.03■■□□□ 1.28
VSX1-202ENST00000376709 CCZ1BP86790 482 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 CCZ1P86791 482 aaPredicted RBP23.03■■□□□ 1.28
VSX1-202ENST00000376709 TPD52L1Q16890 204 aaPredicted RBP23.03■■□□□ 1.28
VSX1-202ENST00000376709 DOK7Q18PE1 504 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 HEATR3Q7Z4Q2 680 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 CCDC148Q8NFR7 591 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 NEDD1Q8NHV4 660 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 LZTS2Q9BRK4 669 aa23.03■■□□□ 1.28
VSX1-202ENST00000376709 PALM3A6NDB9 673 aaPredicted RBP23.02■■□□□ 1.28
VSX1-202ENST00000376709 CYTH3O43739 400 aa23.02■■□□□ 1.28
VSX1-202ENST00000376709 GOLGA8HP0CJ92 632 aa23.02■■□□□ 1.28
VSX1-202ENST00000376709 AFMP43652 599 aa23.02■■□□□ 1.28
VSX1-202ENST00000376709 CFAP100Q494V2 611 aa23.02■■□□□ 1.28
VSX1-202ENST00000376709 CCDC150Q8NCX0 1101 aa23.02■■□□□ 1.28
VSX1-202ENST00000376709 RGS17Q9UGC6 210 aaPredicted RBP23.02■■□□□ 1.28
VSX1-202ENST00000376709 F8W031 263 aaPredicted RBP23.01■■□□□ 1.27
VSX1-202ENST00000376709 WWC2Q6AWC2 1192 aa23.01■■□□□ 1.27
VSX1-202ENST00000376709 FOCADQ5VW36 1801 aa23.01■■□□□ 1.27
VSX1-202ENST00000376709 CCDC194A0A1B0GVG4 234 aa23.01■■□□□ 1.27
VSX1-202ENST00000376709 KLRF2D3W0D1 207 aa23.01■■□□□ 1.27
VSX1-202ENST00000376709 TYW1BQ6NUM6 668 aa23.01■■□□□ 1.27
VSX1-202ENST00000376709 C2CD5Q86YS7 1000 aa23.01■■□□□ 1.27
VSX1-202ENST00000376709 SPATA20Q8TB22 786 aa23.01■■□□□ 1.27
VSX1-202ENST00000376709 SFPQP23246 707 aaKnown RBP eCLIP23■■□□□ 1.27
VSX1-202ENST00000376709 PICALMQ13492 652 aa23■■□□□ 1.27
VSX1-202ENST00000376709 DHX8Q14562 1220 aaKnown RBP23■■□□□ 1.27
VSX1-202ENST00000376709 EZH2Q15910 746 aaKnown RBP23■■□□□ 1.27
VSX1-202ENST00000376709 POTEAQ6S8J7 498 aa23■■□□□ 1.27
VSX1-202ENST00000376709 CERS5Q8N5B7 392 aa23■■□□□ 1.27
VSX1-202ENST00000376709 RASGRP4Q8TDF6 673 aa23■■□□□ 1.27
VSX1-202ENST00000376709 PAGE5Q96GU1 130 aa23■■□□□ 1.27
VSX1-202ENST00000376709 MXD3Q9BW11 206 aa23■■□□□ 1.27
VSX1-202ENST00000376709 BARHL2Q9NY43 387 aa23■■□□□ 1.27
VSX1-202ENST00000376709 RGPD3A6NKT7 1758 aaPredicted RBP23■■□□□ 1.27
VSX1-202ENST00000376709 RGPD4Q7Z3J3 1758 aa23■■□□□ 1.27
VSX1-202ENST00000376709 PARP1P09874 1014 aaKnown RBP23■■□□□ 1.27
VSX1-202ENST00000376709 SLC35G1Q2M3R5 365 aa23■■□□□ 1.27
VSX1-202ENST00000376709 CEP95Q96GE4 821 aa23■■□□□ 1.27
VSX1-202ENST00000376709 TMX4Q9H1E5 349 aaPredicted RBP23■■□□□ 1.27
VSX1-202ENST00000376709 GALNT17Q6IS24 598 aa22.99■■□□□ 1.27
VSX1-202ENST00000376709 RASGRP2Q7LDG7 609 aa22.99■■□□□ 1.27
VSX1-202ENST00000376709 SUGT1Q9Y2Z0 365 aa22.99■■□□□ 1.27
VSX1-202ENST00000376709 NFE2L3Q9Y4A8 694 aa22.99■■□□□ 1.27
VSX1-202ENST00000376709 GOLGB1Q14789 3259 aaKnown RBP22.99■■□□□ 1.27
VSX1-202ENST00000376709 EN1Q05925 392 aaPredicted RBP22.99■■□□□ 1.27
VSX1-202ENST00000376709 FMR1Q06787 632 aaKnown RBP eCLIP22.99■■□□□ 1.27
VSX1-202ENST00000376709 HSP90AA4PQ58FG1 418 aa22.99■■□□□ 1.27
VSX1-202ENST00000376709 DPF2Q92785 391 aa22.99■■□□□ 1.27
VSX1-202ENST00000376709 STXBP3O00186 592 aa22.98■■□□□ 1.27
VSX1-202ENST00000376709 NRDCO43847 1150 aa22.98■■□□□ 1.27
VSX1-202ENST00000376709 TOP1P11387 765 aaKnown RBP22.98■■□□□ 1.27
VSX1-202ENST00000376709 TNNT1P13805 278 aa22.98■■□□□ 1.27
VSX1-202ENST00000376709 ARL6IP4Q66PJ3 421 aaKnown RBP22.98■■□□□ 1.27
VSX1-202ENST00000376709 ARMCX5Q6P1M9 558 aa22.98■■□□□ 1.27
VSX1-202ENST00000376709 SH3RF1Q7Z6J0 888 aa22.98■■□□□ 1.27
VSX1-202ENST00000376709 TRMT44Q8IYL2 757 aaKnown RBP22.98■■□□□ 1.27
VSX1-202ENST00000376709 IQUBQ8NA54 791 aa22.98■■□□□ 1.27
VSX1-202ENST00000376709 SPZ1Q9BXG8 430 aa22.98■■□□□ 1.27
VSX1-202ENST00000376709 TTF2Q9UNY4 1162 aaKnown RBP22.98■■□□□ 1.27
VSX1-202ENST00000376709 G3V3G9 751 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 DCAF8Q5TAQ9 597 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 DAGLBQ8NCG7 672 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 ENOX1Q8TC92 643 aaKnown RBP22.97■■□□□ 1.27
VSX1-202ENST00000376709 PYM1Q9BRP8 204 aaKnown RBP22.97■■□□□ 1.27
VSX1-202ENST00000376709 CPVLQ9H3G5 476 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 PCDHA6Q9UN73 950 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 PCDHA8Q9Y5H6 950 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 M0R2N6 131 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 CDK11BP21127 795 aaKnown RBP22.97■■□□□ 1.27
VSX1-202ENST00000376709 CASP1P29466 404 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 SLC15A2Q16348 729 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 USP17L2Q6R6M4 530 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 TSC1Q92574 1164 aa22.97■■□□□ 1.27
VSX1-202ENST00000376709 ZNF219Q9P2Y4 722 aaPredicted RBP22.97■■□□□ 1.27
VSX1-202ENST00000376709 GTF2F1P35269 517 aaKnown RBP eCLIP22.96■■□□□ 1.27
VSX1-202ENST00000376709 IL17AQ16552 155 aa22.96■■□□□ 1.27
VSX1-202ENST00000376709 HOMER1Q86YM7 354 aa22.96■■□□□ 1.27
VSX1-202ENST00000376709 CCDC12Q8WUD4 166 aaPredicted RBP22.96■■□□□ 1.27
VSX1-202ENST00000376709 GSDMAQ96QA5 445 aa22.96■■□□□ 1.27
VSX1-202ENST00000376709 USP27XA6NNY8 438 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms