RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 IL1RAPL2Q9NP60 686 aa15.86■□□□□ 0.13
CLCN6-205ENST00000376492 XPNPEP3Q9NQH7 507 aa15.86■□□□□ 0.13
CLCN6-205ENST00000376492 SLC5A4Q9NY91 659 aa15.86■□□□□ 0.13
CLCN6-205ENST00000376492 PHF24Q9UPV7 400 aa15.86■□□□□ 0.13
CLCN6-205ENST00000376492 TCRBV5S4A2TA0A5A2 114 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 PGK1P00558 417 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 PGK2P07205 417 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 FCER1AP12319 257 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 TAL1P17542 331 aaPredicted RBP15.85■□□□□ 0.13
CLCN6-205ENST00000376492 ICA1Q05084 483 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 SLFNL1Q499Z3 407 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 RNPC3Q96LT9 517 aaKnown RBP15.85■□□□□ 0.13
CLCN6-205ENST00000376492 VCPKMTQ9H867 229 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 MUC3AQ02505 3323 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 TTC28Q96AY4 2481 aa15.85■□□□□ 0.13
CLCN6-205ENST00000376492 GOLIM4O00461 696 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 PRKAB2O43741 272 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 PQBP1O60828 265 aaKnown RBP15.84■□□□□ 0.13
CLCN6-205ENST00000376492 CLTBP09497 229 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 RARBP10826 455 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 RRP1P56182 461 aaKnown RBP15.84■□□□□ 0.13
CLCN6-205ENST00000376492 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
CLCN6-205ENST00000376492 SIRT2Q8IXJ6 389 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 DNAJC2Q99543 621 aaKnown RBP15.84■□□□□ 0.13
CLCN6-205ENST00000376492 ARMT1Q9H993 441 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 FBXO28Q9NVF7 368 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 TMX2Q9Y320 296 aa15.84■□□□□ 0.13
CLCN6-205ENST00000376492 CYP2D7A0A087X1C5 515 aa15.83■□□□□ 0.12
CLCN6-205ENST00000376492 A0A1W2PQ45 241 aaPredicted RBP15.83■□□□□ 0.12
CLCN6-205ENST00000376492 A0A1W2PQY0 241 aa15.83■□□□□ 0.12
CLCN6-205ENST00000376492 MMP19Q99542 508 aa15.83■□□□□ 0.12
CLCN6-205ENST00000376492 ARHGEF10LQ9HCE6 1279 aa15.83■□□□□ 0.12
CLCN6-205ENST00000376492 TACC3Q9Y6A5 838 aa15.83■□□□□ 0.12
CLCN6-205ENST00000376492 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 WDR46O15213 610 aaKnown RBP15.82■□□□□ 0.12
CLCN6-205ENST00000376492 HMMRO75330 724 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 HSP90AB4PQ58FF6 505 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 ERC1Q8IUD2 1116 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 USP38Q8NB14 1042 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 TINF2Q9BSI4 451 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 BCL11AQ9H165 835 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 SWAP70Q9UH65 585 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
CLCN6-205ENST00000376492 APBB1O00213 710 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 MBD4O95243 580 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 SLC25A27O95847 323 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 CHGBP05060 677 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 ZNF865P0CJ78 1059 aaPredicted RBP15.81■□□□□ 0.12
CLCN6-205ENST00000376492 RAG1P15918 1043 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 GRIN2CQ14957 1233 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 ZNF792Q3KQV3 632 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 RNF180Q86T96 592 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 RHPN1Q8TCX5 695 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 SH2D4AQ9H788 454 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 PRDM6Q9NQX0 595 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 NRBP1Q9UHY1 535 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 ADAMTS5Q9UNA0 930 aa15.81■□□□□ 0.12
CLCN6-205ENST00000376492 ADAMTS4O75173 837 aa15.8■□□□□ 0.12
CLCN6-205ENST00000376492 EEF2P13639 858 aaKnown RBP15.8■□□□□ 0.12
CLCN6-205ENST00000376492 DNAJB2P25686 324 aa15.8■□□□□ 0.12
CLCN6-205ENST00000376492 CDK8P49336 464 aa15.8■□□□□ 0.12
CLCN6-205ENST00000376492 FPGSQ05932 587 aa15.8■□□□□ 0.12
CLCN6-205ENST00000376492 RIOX2Q8IUF8 465 aa15.8■□□□□ 0.12
CLCN6-205ENST00000376492 TMEM39AQ9NV64 488 aa15.8■□□□□ 0.12
CLCN6-205ENST00000376492 SYNRGQ9UMZ2 1314 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 TMEM265A0A087WTH1 108 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 VWA5AO00534 786 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 RAD21O60216 631 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 AKR1A1P14550 325 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 STAT3P40763 770 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 FAAP100Q0VG06 881 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 KCTD2Q14681 263 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 REPS2Q8NFH8 660 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 ZNF214Q9UL59 606 aaPredicted RBP15.79■□□□□ 0.12
CLCN6-205ENST00000376492 PPP1R9AQ9ULJ8 1098 aa15.79■□□□□ 0.12
CLCN6-205ENST00000376492 PARP14Q460N5 1801 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 MYADML2A6NDP7 307 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 USP17L12C9JPN9 530 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 USP17L21D6R901 530 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 FAM83BQ5T0W9 1011 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 C12orf60Q5U649 245 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 ERICH6BQ5W0A0 696 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 C16orf86Q6ZW13 317 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 ANKRD33Q7Z3H0 272 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.78■□□□□ 0.12
CLCN6-205ENST00000376492 CCDC17Q96LX7 622 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 NUP88Q99567 741 aaPredicted RBP15.78■□□□□ 0.12
CLCN6-205ENST00000376492 STARD7Q9NQZ5 370 aa15.78■□□□□ 0.12
CLCN6-205ENST00000376492 DIS3Q9Y2L1 958 aaKnown RBP15.78■□□□□ 0.12
CLCN6-205ENST00000376492 RAB11FIP3O75154 756 aa15.77■□□□□ 0.12
CLCN6-205ENST00000376492 ADD2P35612 726 aa15.77■□□□□ 0.12
CLCN6-205ENST00000376492 ACLYP53396 1101 aa15.77■□□□□ 0.12
CLCN6-205ENST00000376492 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.12
CLCN6-205ENST00000376492 ZNF576Q9H609 170 aa15.77■□□□□ 0.12
CLCN6-205ENST00000376492 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.12
CLCN6-205ENST00000376492 PAG1Q9NWQ8 432 aa15.77■□□□□ 0.12
CLCN6-205ENST00000376492 CNPY2Q9Y2B0 182 aa15.77■□□□□ 0.12
CLCN6-205ENST00000376492 COL11A1P12107 1806 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.76■□□□□ 0.11
CLCN6-205ENST00000376492 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms