RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
PDPN-202ENST00000376057 USP17L5A8MUK1 530 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 BTBD18B2RXH4 712 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 TCP10L2B9ZVM9 353 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 GNL2Q13823 731 aaKnown RBP12.8□□□□□ -0.36
PDPN-202ENST00000376057 RBM43Q6ZSC3 357 aaKnown RBP12.8□□□□□ -0.36
PDPN-202ENST00000376057 TEPSINQ96N21 525 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 ZMYND12Q9H0C1 365 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 PCDHA4Q9UN74 947 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 CEP131Q9UPN4 1083 aa12.8□□□□□ -0.36
PDPN-202ENST00000376057 STXBP3O00186 592 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 SPTLC2O15270 562 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 PLA2G6O60733 806 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 EEF2P13639 858 aaKnown RBP12.79□□□□□ -0.36
PDPN-202ENST00000376057 NBPF9Q3BBW0 867 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 L1TD1Q5T7N2 865 aaKnown RBP12.79□□□□□ -0.36
PDPN-202ENST00000376057 BTNL9Q6UXG8 535 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 KCNJ14Q9UNX9 436 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 CLIC4Q9Y696 253 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 GOLGA6L4A6NEF3 574 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 FOSBP53539 338 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 LRSAM1Q6UWE0 723 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 CCDC82Q8N4S0 544 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 ZNF579Q8NAF0 562 aaKnown RBP12.79□□□□□ -0.36
PDPN-202ENST00000376057 SYT17Q9BSW7 474 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 VPS54Q9P1Q0 977 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 ATAD5Q96QE3 1844 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 PITPNM2Q9BZ72 1349 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
PDPN-202ENST00000376057 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
PDPN-202ENST00000376057 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 H7C1D1 291 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 TOB1P50616 345 aaPredicted RBP12.78□□□□□ -0.36
PDPN-202ENST00000376057 ICA1Q05084 483 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 USP17L2Q6R6M4 530 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 APOBEC3FQ8IUX4 373 aaKnown RBP12.78□□□□□ -0.36
PDPN-202ENST00000376057 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 MPHOSPH10O00566 681 aaKnown RBP12.78□□□□□ -0.36
PDPN-202ENST00000376057 CMA1P23946 247 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 ORC2Q13416 577 aaPredicted RBP12.78□□□□□ -0.36
PDPN-202ENST00000376057 STK38Q15208 465 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 ELOA2Q8IYF1 753 aaPredicted RBP12.78□□□□□ -0.36
PDPN-202ENST00000376057 PCDHA7Q9UN72 937 aa12.78□□□□□ -0.36
PDPN-202ENST00000376057 PNMA6FA0A0J9YX94 578 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 CAP2P40123 477 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 SEPT2Q15019 361 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 KIF4BQ2VIQ3 1234 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 AXDND1Q5T1B0 1012 aaPredicted RBP12.77□□□□□ -0.36
PDPN-202ENST00000376057 WWC2Q6AWC2 1192 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 BLIDQ8IZY5 108 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.36
PDPN-202ENST00000376057 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.36
PDPN-202ENST00000376057 TMX2Q9Y320 296 aa12.77□□□□□ -0.36
PDPN-202ENST00000376057 GOLGA6L3A6NEY3 463 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 PHF20L1A8MW92 1017 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 CUTAO60888 179 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 NLRP5P59047 1200 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
PDPN-202ENST00000376057 SF3A1Q15459 793 aaKnown RBP12.77□□□□□ -0.37
PDPN-202ENST00000376057 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 BICD2Q8TD16 824 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 GLT8D2Q9H1C3 349 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.37
PDPN-202ENST00000376057 CTAGE5O15320 804 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 GNA11P29992 359 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 LRRC47Q8N1G4 583 aaKnown RBP12.76□□□□□ -0.37
PDPN-202ENST00000376057 OXER1Q8TDS5 423 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 CLSTN2Q9H4D0 955 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 VEZTQ9HBM0 779 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 ZNF112Q9UJU3 913 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 ZBTB21Q9ULJ3 1066 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 GH2P01242 217 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 MRE11P49959 708 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 RASA3Q14644 834 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 SLFN13Q68D06 897 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 TIGD1Q96MW7 591 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
PDPN-202ENST00000376057 JMJD4Q9H9V9 463 aa12.76□□□□□ -0.37
PDPN-202ENST00000376057 DOCK1Q14185 1865 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 ASNSP08243 561 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 SNW1Q13573 536 aaKnown RBP12.75□□□□□ -0.37
PDPN-202ENST00000376057 MCTP2Q6DN12 878 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 MRPS27Q92552 414 aaKnown RBP12.75□□□□□ -0.37
PDPN-202ENST00000376057 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDPN-202ENST00000376057 C6orf50Q9HD87 102 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 ZBTB5O15062 677 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
PDPN-202ENST00000376057 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 ME1P48163 572 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 JAG1P78504 1218 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 TRAF1Q13077 416 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 NR5A1Q13285 461 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 CCAR1Q8IX12 1150 aaKnown RBP12.75□□□□□ -0.37
PDPN-202ENST00000376057 ADGRF4Q8IZF3 695 aa12.75□□□□□ -0.37
PDPN-202ENST00000376057 GOPCQ9HD26 462 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms