RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 PAGE5Q96GU1 130 aa17.21■□□□□ 0.35
MSH5-203ENST00000375750 STK36Q9NRP7 1315 aa17.21■□□□□ 0.35
MSH5-203ENST00000375750 MINDY4BA8MYZ0 360 aa17.21■□□□□ 0.35
MSH5-203ENST00000375750 MYO1BO43795 1136 aa17.21■□□□□ 0.35
MSH5-203ENST00000375750 SDR42E1Q8WUS8 393 aa17.21■□□□□ 0.35
MSH5-203ENST00000375750 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
MSH5-203ENST00000375750 FOXP1Q9H334 677 aaPredicted RBP17.21■□□□□ 0.35
MSH5-203ENST00000375750 ADAM21Q9UKJ8 722 aa17.21■□□□□ 0.35
MSH5-203ENST00000375750 TFR2Q9UP52 801 aa17.21■□□□□ 0.35
MSH5-203ENST00000375750 COL1A1P02452 1464 aaPredicted RBP17.21■□□□□ 0.34
MSH5-203ENST00000375750 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 GRAPQ13588 217 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 GRAPLQ8TC17 118 aaPredicted RBP17.2■□□□□ 0.34
MSH5-203ENST00000375750 ANKRD2Q9GZV1 360 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 ADD3Q9UEY8 706 aaKnown RBP17.2■□□□□ 0.34
MSH5-203ENST00000375750 DACH1Q9UI36 760 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 CTNND2Q9UQB3 1225 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 MAPK8IP1Q9UQF2 711 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 TULP2O00295 520 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 GYPCP04921 128 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 CUL4BQ13620 913 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 SRGAP1Q7Z6B7 1085 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 ADGRA1Q86SQ6 560 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 VPS16Q9H269 839 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 ABCB6Q9NP58 842 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 ANKIB1Q9P2G1 1089 aa17.2■□□□□ 0.34
MSH5-203ENST00000375750 BAZ2BQ9UIF8 2168 aaKnown RBP17.2■□□□□ 0.34
MSH5-203ENST00000375750 SPATA20Q8TB22 786 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
MSH5-203ENST00000375750 TRIM10Q9UDY6 481 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 JAG2Q9Y219 1238 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 PLSCR1O15162 318 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 DEXIO95424 95 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 ERVK-24P63145 666 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 SPATA1Q5VX52 437 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 WASF1Q92558 559 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 RPGRQ92834 1020 aaKnown RBP17.19■□□□□ 0.34
MSH5-203ENST00000375750 PANX2Q96RD6 677 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 VPS18Q9P253 973 aa17.19■□□□□ 0.34
MSH5-203ENST00000375750 PPP1R3GB7ZBB8 358 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
MSH5-203ENST00000375750 ATP8B1O43520 1251 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 MFAP3LO75121 409 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 PHACTR2O75167 634 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 PLEKHA8P1O95397 391 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 HIBADHP31937 336 aaKnown RBP17.18■□□□□ 0.34
MSH5-203ENST00000375750 EVX2Q03828 476 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 A0A1B0GUL6 1792 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 KIF5CO60282 957 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 CYP7A1P22680 504 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 PBX1P40424 430 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 ALX1Q15699 326 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 BEND6Q5SZJ8 279 aaPredicted RBP17.18■□□□□ 0.34
MSH5-203ENST00000375750 COL23A1Q86Y22 540 aaPredicted RBP17.18■□□□□ 0.34
MSH5-203ENST00000375750 CDC23Q9UJX2 597 aa17.18■□□□□ 0.34
MSH5-203ENST00000375750 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
MSH5-203ENST00000375750 ZSCAN26Q16670 478 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
MSH5-203ENST00000375750 KRT23Q9C075 422 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 TAB2Q9NYJ8 693 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 V9GY48 417 aaPredicted RBP17.17■□□□□ 0.34
MSH5-203ENST00000375750 TRIM75PA6NK02 468 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 MAP2K7O14733 419 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 TRIM66O15016 1216 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 ERCC5P28715 1186 aaPredicted RBP17.17■□□□□ 0.34
MSH5-203ENST00000375750 VSNL1P62760 191 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 FAM193AP78312 1265 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 PKN1Q16512 942 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 NCAPH2Q6IBW4 605 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 TXLNBQ8N3L3 684 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 NOA1Q8NC60 698 aaKnown RBP17.17■□□□□ 0.34
MSH5-203ENST00000375750 SLF1Q9BQI6 1058 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 RGS17Q9UGC6 210 aaPredicted RBP17.17■□□□□ 0.34
MSH5-203ENST00000375750 ERICH2A1L162 156 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 CDKAL1Q5VV42 579 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 ELOA2Q8IYF1 753 aaPredicted RBP17.17■□□□□ 0.34
MSH5-203ENST00000375750 TRIML1Q8N9V2 468 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
MSH5-203ENST00000375750 RGS22Q8NE09 1264 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
MSH5-203ENST00000375750 CCDC151A5D8V7 595 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
MSH5-203ENST00000375750 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 FOXR1Q6PIV2 292 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 KRT31Q15323 416 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 JAKMIP3Q5VZ66 844 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 RASGRP2Q7LDG7 609 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 ZNF384Q8TF68 577 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 CNNM2Q9H8M5 875 aa17.16■□□□□ 0.34
MSH5-203ENST00000375750 FEZ2Q9UHY8 353 aaPredicted RBP17.16■□□□□ 0.34
MSH5-203ENST00000375750 TNKSO95271 1327 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 CHP1Q99653 195 aa17.15■□□□□ 0.34
MSH5-203ENST00000375750 UBAC1Q9BSL1 405 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms