RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SKILP12757 684 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 ATP1A3P13637 1013 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 RASA1P20936 1047 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 FANCCQ00597 558 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 MYL5Q02045 173 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 ERCC6LQ2NKX8 1250 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 CCDC178Q5BJE1 867 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 KLRG2A4D1S0 409 aaPredicted RBP15.91■□□□□ 0.14
MSH5-202ENST00000375740 CYP2C19P33261 490 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 SARSP49591 514 aaKnown RBP15.91■□□□□ 0.14
MSH5-202ENST00000375740 GRM4Q14833 912 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 PIK3AP1Q6ZUJ8 805 aa15.91■□□□□ 0.14
MSH5-202ENST00000375740 BRWD3Q6RI45 1802 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 CDK5RAP2Q96SN8 1893 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 BMP15O95972 392 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 PTGDRQ13258 359 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 NT5DC1Q5TFE4 455 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 KANK3Q6NY19 840 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 FERMT2Q96AC1 680 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 ERO1AQ96HE7 468 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 IMPACTQ9P2X3 320 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 MAD2L2Q9UI95 211 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 MTMR7Q9Y216 660 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 A0A087X0B3 334 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 CDK8P49336 464 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 TMC6Q7Z403 805 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 GPKOWQ92917 476 aaPredicted RBP eCLIP15.9■□□□□ 0.144e-8■■■■□ 19.5
MSH5-202ENST00000375740 SMARCE1Q969G3 411 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 DHX58Q96C10 678 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 FAM163AQ96GL9 167 aaPredicted RBP15.9■□□□□ 0.14
MSH5-202ENST00000375740 TMEM47Q9BQJ4 181 aa15.9■□□□□ 0.14
MSH5-202ENST00000375740 OSBPL5Q9H0X9 879 aaPredicted RBP15.9■□□□□ 0.14
MSH5-202ENST00000375740 RIMBP2O15034 1052 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 RHBDL3P58872 404 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 SP8Q8IXZ3 490 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 SYMPKQ92797 1274 aaKnown RBP15.89■□□□□ 0.13
MSH5-202ENST00000375740 FANCLQ9NW38 375 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 STX8Q9UNK0 236 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 FHOD1Q9Y613 1164 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 PPEF1O14829 653 aaPredicted RBP15.89■□□□□ 0.13
MSH5-202ENST00000375740 PLCG2P16885 1265 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 GSDMDP57764 484 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 CCZ1BP86790 482 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 CCZ1P86791 482 aaPredicted RBP15.89■□□□□ 0.13
MSH5-202ENST00000375740 SLC20A2Q08357 652 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 SLC35G1Q2M3R5 365 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 TBC1D22AQ8WUA7 517 aa15.89■□□□□ 0.13
MSH5-202ENST00000375740 SLU7O95391 586 aaKnown RBP15.88■□□□□ 0.13
MSH5-202ENST00000375740 GNAQP50148 359 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 GTF2IP78347 998 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 ATP2C1P98194 919 aaPredicted RBP15.88■□□□□ 0.13
MSH5-202ENST00000375740 MORC3Q14149 939 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 SLF2Q8IX21 1173 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 ZNF287Q9HBT7 754 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 FLT1P17948 1338 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 VWA3AA6NCI4 1184 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 CALML3P27482 149 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 C16orf86Q6ZW13 317 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 BLIDQ8IZY5 108 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 DPF2Q92785 391 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 EYA3Q99504 573 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 SH3GLB2Q9NR46 395 aa15.88■□□□□ 0.13
MSH5-202ENST00000375740 SERPINC1P01008 464 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 MCM7P33993 719 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 PLA2G4AP47712 749 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 TRAPPC10P48553 1259 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 UBASH3AP57075 661 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 ZNF827Q17R98 1081 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 FEZ2Q9UHY8 353 aaPredicted RBP15.87■□□□□ 0.13
MSH5-202ENST00000375740 GAKO14976 1311 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 FAM205AQ6ZU69 1335 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 PALM3A6NDB9 673 aaPredicted RBP15.87■□□□□ 0.13
MSH5-202ENST00000375740 CYTH3O43739 400 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 AFMP43652 599 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 CLCN6P51797 869 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 TYW1BQ6NUM6 668 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 CCAR2Q8N163 923 aaKnown RBP15.87■□□□□ 0.13
MSH5-202ENST00000375740 MLKLQ8NB16 471 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 NEK11Q8NG66 645 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 SPATA20Q8TB22 786 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 PCDHA4Q9UN74 947 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 ATP6V0A2Q9Y487 856 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 EP400Q96L91 3159 aa15.87■□□□□ 0.13
MSH5-202ENST00000375740 GOLGA8HP0CJ92 632 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 H2AFXP16104 143 aaPredicted RBP15.86■□□□□ 0.13
MSH5-202ENST00000375740 TMC4Q7Z404 712 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 TRIML1Q8N9V2 468 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 NEDD1Q8NHV4 660 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 ZBTB9Q96C00 473 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 PAGE5Q96GU1 130 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.86■□□□□ 0.13
MSH5-202ENST00000375740 FMR1Q06787 632 aaKnown RBP eCLIP15.86■□□□□ 0.13
MSH5-202ENST00000375740 RAD51AP2Q09MP3 1159 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 IL17AQ16552 155 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 ARMCX5Q6P1M9 558 aa15.86■□□□□ 0.13
MSH5-202ENST00000375740 SH3RF1Q7Z6J0 888 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 RASGRP4Q8TDF6 673 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 DAGLAQ9Y4D2 1042 aa15.85■□□□□ 0.13
MSH5-202ENST00000375740 MYH1P12882 1939 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms