RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 RCSD1Q6JBY9 416 aa24.73■■□□□ 1.55
MAP1LC3A-202ENST00000374837 FBXO46Q6PJ61 603 aaPredicted RBP24.73■■□□□ 1.55
MAP1LC3A-202ENST00000374837 SAMD1Q6SPF0 538 aaPredicted RBP24.73■■□□□ 1.55
MAP1LC3A-202ENST00000374837 TTC14Q96N46 770 aa24.73■■□□□ 1.55
MAP1LC3A-202ENST00000374837 TMEM47Q9BQJ4 181 aa24.73■■□□□ 1.55
MAP1LC3A-202ENST00000374837 BTBD7Q9P203 1132 aa24.73■■□□□ 1.55
MAP1LC3A-202ENST00000374837 PTPN22Q9Y2R2 807 aa24.73■■□□□ 1.55
MAP1LC3A-202ENST00000374837 E7EWF7 191 aa24.72■■□□□ 1.55
MAP1LC3A-202ENST00000374837 TOP1P11387 765 aaKnown RBP24.72■■□□□ 1.55
MAP1LC3A-202ENST00000374837 NECTIN1Q15223 517 aa24.72■■□□□ 1.55
MAP1LC3A-202ENST00000374837 PRPF38BQ5VTL8 546 aaKnown RBP24.72■■□□□ 1.55
MAP1LC3A-202ENST00000374837 STOX1Q6ZVD7 989 aa24.72■■□□□ 1.55
MAP1LC3A-202ENST00000374837 ATG4CQ96DT6 458 aa24.72■■□□□ 1.55
MAP1LC3A-202ENST00000374837 MYPNQ86TC9 1320 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 SLC27A2O14975 620 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 MCCP23508 829 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 HOXD10P28358 340 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 TRDNQ13061 729 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 IQCA1Q86XH1 822 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 CHMP4CQ96CF2 233 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 SRRDQ9UH36 339 aa24.71■■□□□ 1.55
MAP1LC3A-202ENST00000374837 BMP3P12645 472 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 CCDC178Q5BJE1 867 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 CREB3L3Q68CJ9 461 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 CYB5R4Q7L1T6 521 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 DGKHQ86XP1 1220 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 GMCL1Q96IK5 515 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 ZSCAN10Q96SZ4 725 aaPredicted RBP24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PPP1R9AQ9ULJ8 1098 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 ADAMTS5Q9UNA0 930 aa24.7■■□□□ 1.54
MAP1LC3A-202ENST00000374837 TNPO2O14787 897 aaKnown RBP24.69■■□□□ 1.54
MAP1LC3A-202ENST00000374837 SLC1A4P43007 532 aa24.69■■□□□ 1.54
MAP1LC3A-202ENST00000374837 MB21D1Q8N884 522 aa24.69■■□□□ 1.54
MAP1LC3A-202ENST00000374837 ANKS1AQ92625 1134 aa24.69■■□□□ 1.54
MAP1LC3A-202ENST00000374837 SLF1Q9BQI6 1058 aa24.69■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PORCNQ9H237 461 aa24.69■■□□□ 1.54
MAP1LC3A-202ENST00000374837 MTMR7Q9Y216 660 aa24.69■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PRMT2P55345 433 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 RASGRP2Q7LDG7 609 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 NCOA7Q8NI08 942 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 FEM1BQ9UK73 627 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 GABRQQ9UN88 632 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 HPS5Q9UPZ3 1129 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PTCH2Q9Y6C5 1203 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 LAMA4Q16363 1823 aa24.68■■□□□ 1.54
MAP1LC3A-202ENST00000374837 TMEM232C9JQI7 657 aa24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 CCNA1P78396 465 aa24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PRKCZQ05513 592 aa24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 RALYLQ86SE5 291 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 ENAHQ8N8S7 591 aaPredicted RBP24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PRPF38AQ8NAV1 312 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 COA7Q96BR5 231 aa24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 UBAC1Q9BSL1 405 aa24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 ISY1Q9ULR0 285 aaKnown RBP24.67■■□□□ 1.54
MAP1LC3A-202ENST00000374837 TNKSO95271 1327 aa24.66■■□□□ 1.54
MAP1LC3A-202ENST00000374837 VWA5AO00534 786 aa24.66■■□□□ 1.54
MAP1LC3A-202ENST00000374837 MAPK4P31152 587 aa24.66■■□□□ 1.54
MAP1LC3A-202ENST00000374837 KCTD1Q719H9 257 aa24.66■■□□□ 1.54
MAP1LC3A-202ENST00000374837 CCAR1Q8IX12 1150 aaKnown RBP24.66■■□□□ 1.54
MAP1LC3A-202ENST00000374837 DCAF4Q8WV16 495 aa24.66■■□□□ 1.54
MAP1LC3A-202ENST00000374837 TMEM132BQ14DG7 1078 aa24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 MB21D2Q8IYB1 491 aaPredicted RBP24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 REPS2Q8NFH8 660 aa24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 KIFC2Q96AC6 838 aa24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 MOV10L1Q9BXT6 1211 aaKnown RBP24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 SPATC1LQ9H0A9 340 aa24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 GJD2Q9UKL4 321 aa24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 ZSWIM8A7E2V4 1837 aa24.65■■□□□ 1.54
MAP1LC3A-202ENST00000374837 FLT3LGP49771 235 aa24.64■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PLS1Q14651 629 aa24.64■■□□□ 1.54
MAP1LC3A-202ENST00000374837 SEC23AQ15436 765 aa24.64■■□□□ 1.54
MAP1LC3A-202ENST00000374837 RNF20Q5VTR2 975 aa24.64■■□□□ 1.54
MAP1LC3A-202ENST00000374837 CHURC1Q8WUH1 139 aa24.64■■□□□ 1.54
MAP1LC3A-202ENST00000374837 KAT14Q9H8E8 782 aa24.64■■□□□ 1.54
MAP1LC3A-202ENST00000374837 PLA2G6O60733 806 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 PDHBP11177 359 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 ANTXR2P58335 489 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 CCDC96Q2M329 555 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 CHST3Q7LGC8 479 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 GPR142Q7Z601 462 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 PLEKHH3Q7Z736 793 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 FAM160B2Q86V87 743 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 RAET1EQ8TD07 263 aa24.63■■□□□ 1.53
MAP1LC3A-202ENST00000374837 IFIT3O14879 490 aaKnown RBP24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 ZBED4O75132 1171 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 REC8O95072 547 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 SNHG28P0DPA3 235 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 STAT2P52630 851 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 IFIT1BQ5T764 474 aaKnown RBP24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 TTBK2Q6IQ55 1244 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 RASEFQ8IZ41 740 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 PNMA1Q8ND90 353 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 GPCPD1Q9NPB8 672 aa24.62■■□□□ 1.53
MAP1LC3A-202ENST00000374837 RLFQ13129 1914 aa24.61■■□□□ 1.53
MAP1LC3A-202ENST00000374837 MYH4Q9Y623 1939 aa24.61■■□□□ 1.53
MAP1LC3A-202ENST00000374837 ERCC3P19447 782 aa24.61■■□□□ 1.53
MAP1LC3A-202ENST00000374837 STAT3P40763 770 aa24.61■■□□□ 1.53
MAP1LC3A-202ENST00000374837 IKQ13123 557 aaPredicted RBP24.61■■□□□ 1.53
MAP1LC3A-202ENST00000374837 COL9A3Q14050 684 aaPredicted RBP24.61■■□□□ 1.53
MAP1LC3A-202ENST00000374837 TSGA10IPQ3SY00 556 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms