RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 ENTPD3O75355 529 aa19.39■□□□□ 0.69
PTPN20-203ENST00000374342 CALML3P27482 149 aa19.39■□□□□ 0.69
PTPN20-203ENST00000374342 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.69
PTPN20-203ENST00000374342 CCDC17Q96LX7 622 aa19.39■□□□□ 0.69
PTPN20-203ENST00000374342 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.39■□□□□ 0.69
PTPN20-203ENST00000374342 CEP131Q9UPN4 1083 aa19.39■□□□□ 0.69
PTPN20-203ENST00000374342 MRVI1Q9Y6F6 885 aa19.39■□□□□ 0.69
PTPN20-203ENST00000374342 CLRN2A0PK11 232 aa19.38■□□□□ 0.69
PTPN20-203ENST00000374342 TRIM75PA6NK02 468 aa19.38■□□□□ 0.69
PTPN20-203ENST00000374342 DLGAP5Q15398 846 aa19.38■□□□□ 0.69
PTPN20-203ENST00000374342 SHC4Q6S5L8 630 aa19.38■□□□□ 0.69
PTPN20-203ENST00000374342 HOMER1Q86YM7 354 aa19.38■□□□□ 0.69
PTPN20-203ENST00000374342 OGFOD1Q8N543 542 aa19.38■□□□□ 0.69
PTPN20-203ENST00000374342 KRI1Q8N9T8 703 aaKnown RBP19.38■□□□□ 0.69
PTPN20-203ENST00000374342 CCDC148Q8NFR7 591 aa19.38■□□□□ 0.69
PTPN20-203ENST00000374342 TCP10L2B9ZVM9 353 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 ADAMTS3O15072 1205 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 SHROOM1Q2M3G4 852 aaPredicted RBP19.37■□□□□ 0.69
PTPN20-203ENST00000374342 ASPRV1Q53RT3 343 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 TYW1BQ6NUM6 668 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 RRP36Q96EU6 259 aaKnown RBP19.37■□□□□ 0.69
PTPN20-203ENST00000374342 PSDA5PKW4 1024 aaPredicted RBP19.37■□□□□ 0.69
PTPN20-203ENST00000374342 STXBP3O00186 592 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 CERKLQ49MI3 558 aaPredicted RBP19.37■□□□□ 0.69
PTPN20-203ENST00000374342 RESP18Q5W5W9 173 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 PIK3AP1Q6ZUJ8 805 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 BLIDQ8IZY5 108 aa19.37■□□□□ 0.69
PTPN20-203ENST00000374342 SEC63Q9UGP8 760 aaKnown RBP19.37■□□□□ 0.69
PTPN20-203ENST00000374342 FBXO2Q9UK22 296 aaPredicted RBP19.37■□□□□ 0.69
PTPN20-203ENST00000374342 ANO6Q4KMQ2 910 aa19.36■□□□□ 0.69
PTPN20-203ENST00000374342 CSRNP1Q96S65 589 aa19.36■□□□□ 0.69
PTPN20-203ENST00000374342 PPP1R9BQ96SB3 815 aa19.36■□□□□ 0.69
PTPN20-203ENST00000374342 BARHL2Q9NY43 387 aa19.36■□□□□ 0.69
PTPN20-203ENST00000374342 PCDHA4Q9UN74 947 aa19.36■□□□□ 0.69
PTPN20-203ENST00000374342 NFKBIEO00221 500 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 WNT7AO00755 349 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 ZNF202O95125 648 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 CXCL9Q07325 125 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 PPP4R3BQ5MIZ7 849 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 TTC38Q5R3I4 469 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 AGBL3Q8NEM8 1001 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 SGIP1Q9BQI5 828 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 SDF4Q9BRK5 362 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 UBA5Q9GZZ9 404 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 VAT1LQ9HCJ6 419 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 GPCPD1Q9NPB8 672 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 ZNF70Q9UC06 446 aaPredicted RBP19.35■□□□□ 0.69
PTPN20-203ENST00000374342 BCS1LQ9Y276 419 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 GDF11O95390 407 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 SNHG28P0DPA3 235 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 SYKP43405 635 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 CCDC96Q2M329 555 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 UVSSAQ2YD98 709 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 FOXP4Q8IVH2 680 aaPredicted RBP19.35■□□□□ 0.69
PTPN20-203ENST00000374342 RASGRP4Q8TDF6 673 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 JDP2Q8WYK2 163 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 PIGSQ96S52 555 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 HPSEQ9Y251 543 aa19.35■□□□□ 0.69
PTPN20-203ENST00000374342 PTPREP23469 700 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 SMARCA1P28370 1054 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 NAPAP54920 295 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 GRIN1Q05586 938 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 SPDYE2Q495Y8 402 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 CIAPIN1Q6FI81 312 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 TATDN1Q6P1N9 297 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 FAM200AQ8TCP9 573 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 VEZTQ9HBM0 779 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 CD2APQ9Y5K6 639 aa19.34■□□□□ 0.69
PTPN20-203ENST00000374342 ZNF543Q08ER8 600 aa19.33■□□□□ 0.69
PTPN20-203ENST00000374342 SPECC1Q5M775 1068 aa19.33■□□□□ 0.69
PTPN20-203ENST00000374342 DAGLBQ8NCG7 672 aa19.33■□□□□ 0.69
PTPN20-203ENST00000374342 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.69
PTPN20-203ENST00000374342 CNTNAP1P78357 1384 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 RAD21O60216 631 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 BMP15O95972 392 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.68
PTPN20-203ENST00000374342 ICA1Q05084 483 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 SEPT2Q15019 361 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 ZNF174Q15697 407 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 STX1AQ16623 288 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 ABCB5Q2M3G0 1257 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 CCDC12Q8WUD4 166 aaPredicted RBP19.33■□□□□ 0.68
PTPN20-203ENST00000374342 DNAJC25Q9H1X3 360 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 RIOX1Q9H6W3 641 aa19.33■□□□□ 0.68
PTPN20-203ENST00000374342 FAM237AA0A1B0GTK4 181 aa19.32■□□□□ 0.68
PTPN20-203ENST00000374342 GALNT17Q6IS24 598 aa19.32■□□□□ 0.68
PTPN20-203ENST00000374342 TMEM179Q6ZVK1 233 aa19.32■□□□□ 0.68
PTPN20-203ENST00000374342 METTL16Q86W50 562 aaKnown RBP19.32■□□□□ 0.68
PTPN20-203ENST00000374342 KANSL2Q9H9L4 492 aa19.32■□□□□ 0.68
PTPN20-203ENST00000374342 USP25Q9UHP3 1055 aa19.32■□□□□ 0.68
PTPN20-203ENST00000374342 SRPRBQ9Y5M8 271 aaKnown RBP19.32■□□□□ 0.68
PTPN20-203ENST00000374342 CCDC194A0A1B0GVG4 234 aa19.31■□□□□ 0.68
PTPN20-203ENST00000374342 TRAPPC10P48553 1259 aa19.31■□□□□ 0.68
PTPN20-203ENST00000374342 RASSF7Q02833 373 aa19.31■□□□□ 0.68
PTPN20-203ENST00000374342 FAM177A1Q8N128 213 aaPredicted RBP19.31■□□□□ 0.68
PTPN20-203ENST00000374342 TRIM44Q96DX7 344 aaPredicted RBP19.31■□□□□ 0.68
PTPN20-203ENST00000374342 FAM13BQ9NYF5 915 aa19.31■□□□□ 0.68
PTPN20-203ENST00000374342 KCNH3Q9ULD8 1083 aa19.31■□□□□ 0.68
PTPN20-203ENST00000374342 PTGER2P43116 358 aa19.31■□□□□ 0.68
PTPN20-203ENST00000374342 KCTD1Q719H9 257 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms