RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ZNF185O15231 689 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 PPP1R37O75864 691 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 CDC25AP30304 524 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 STX17P56962 302 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 HDLBPQ00341 1268 aaKnown RBP14.46□□□□□ -0.09
PRPF4-201ENST00000374198 E2F5Q15329 346 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 EMC10Q5UCC4 262 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 KCTD16Q68DU8 428 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 KRT40Q6A162 431 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 SPATA20Q8TB22 786 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 LTV1Q96GA3 475 aaPredicted RBP14.46□□□□□ -0.09
PRPF4-201ENST00000374198 CHP1Q99653 195 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 ALG1Q9BT22 464 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 SEC31BQ9NQW1 1179 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 RGPD5Q99666 1765 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 SYNRGQ9UMZ2 1314 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 GBP2P32456 591 aaPredicted RBP14.46□□□□□ -0.09
PRPF4-201ENST00000374198 ADCY2Q08462 1091 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 RCSD1Q6JBY9 416 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 CCDC121Q6ZUS5 278 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 MMGT1Q8N4V1 131 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 MAB21L3Q8N8X9 362 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 TATDN2Q93075 761 aa14.46□□□□□ -0.09
PRPF4-201ENST00000374198 SPATS2LQ9NUQ6 558 aaKnown RBP14.46□□□□□ -0.09
PRPF4-201ENST00000374198 DBF4Q9UBU7 674 aaPredicted RBP14.46□□□□□ -0.09
PRPF4-201ENST00000374198 SKAP2O75563 359 aaPredicted RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 FAM107AO95990 144 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 SSBP05455 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 KRT9P35527 623 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 EPHB4P54760 987 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 ICA1Q05084 483 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 CCDC122Q5T0U0 273 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 KLHL10Q6JEL2 608 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 EMBQ6PCB8 327 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 TMED8Q6PL24 325 aaPredicted RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 BARGINQ6ZT62 677 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 LINS1Q8NG48 757 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 AIDAQ96BJ3 306 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 SH3GL3Q99963 347 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 NLRP2Q9NX02 1062 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 THRAP3Q9Y2W1 955 aaKnown RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 BRWD3Q6RI45 1802 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 GCKP35557 465 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 SEC24CP53992 1094 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 CUL4BQ13620 913 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 AP1ARQ63HQ0 302 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 EHBP1Q8NDI1 1231 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 HDAC7Q8WUI4 952 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 RPSAP08865 295 aaKnown RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 CD44P16070 742 aaKnown RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 TRIM14Q14142 442 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 EZH2Q15910 746 aaKnown RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 KANK3Q6NY19 840 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 STK11IPQ8N1F8 1099 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 IP6K1Q92551 441 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 CALR3Q96L12 384 aaKnown RBP14.45□□□□□ -0.1
PRPF4-201ENST00000374198 ZIM3Q96PE6 472 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 LRRC1Q9BTT6 524 aa14.45□□□□□ -0.1
PRPF4-201ENST00000374198 PRC1O43663 620 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 PPP1R12BO60237 982 aaPredicted RBP14.44□□□□□ -0.1
PRPF4-201ENST00000374198 CCT6AP40227 531 aaKnown RBP14.44□□□□□ -0.1
PRPF4-201ENST00000374198 TFCP2Q12800 502 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 ZMYM1Q5SVZ6 1142 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 CAVIN3Q969G5 261 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 DBNDD2Q9BQY9 259 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 POLD4Q9HCU8 107 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 HAUS2Q9NVX0 235 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 EME2A4GXA9 379 aaPredicted RBP14.44□□□□□ -0.1
PRPF4-201ENST00000374198 KCNQ3O43525 872 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 KRT14P02533 472 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 HERVK_113P62684 666 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 IFFO1Q0D2I5 559 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 RSRC1Q96IZ7 334 aaKnown RBP14.44□□□□□ -0.1
PRPF4-201ENST00000374198 TFR2Q9UP52 801 aa14.44□□□□□ -0.1
PRPF4-201ENST00000374198 PALLDQ8WX93 1383 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 ANO9A1A5B4 782 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 SRRM3A6NNA2 597 aaPredicted RBP14.43□□□□□ -0.1
PRPF4-201ENST00000374198 N4BP3O15049 544 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 ACTN4O43707 911 aaKnown RBP14.43□□□□□ -0.1
PRPF4-201ENST00000374198 HOXC9P31274 260 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 MDH1P40925 334 aaKnown RBP14.43□□□□□ -0.1
PRPF4-201ENST00000374198 GRIN1Q05586 938 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 FAM182BQ5T319 152 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 KIF9Q9HAQ2 790 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 ETAA1Q9NY74 926 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 DNM1LO00429 736 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 NR1D1P20393 614 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 ZNF662Q6ZS27 426 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 BATF3Q9NR55 127 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 BSDC1Q9NW68 430 aaPredicted RBP14.43□□□□□ -0.1
PRPF4-201ENST00000374198 TAOK2Q9UL54 1235 aa14.43□□□□□ -0.1
PRPF4-201ENST00000374198 MYH8P13535 1937 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 APBA1Q02410 837 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 KRT31Q15323 416 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 PROSER3Q2NL68 480 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 HOOK2Q96ED9 719 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 CYFIP2Q96F07 1278 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 OSBPL7Q9BZF2 842 aa14.42□□□□□ -0.1
PRPF4-201ENST00000374198 JADE2Q9NQC1 790 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms