RNA–Protein interactions for RNA: ENST00000373703.4

PEF1-201, Transcript of penta-EF-hand domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEF1, Length 1,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-201ENST00000373703 USP17L11C9JVI0 530 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 USP17L18D6R9N7 530 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 USP17L22D6RA61 530 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 USP17L17D6RBQ6 530 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 USP17L19D6RCP7 530 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 USP17L20D6RJB6 530 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 BMP3P12645 472 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 RXRAP19793 462 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 USP17L24Q0WX57 530 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 CCDC96Q2M329 555 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 OTUD7BQ6GQQ9 843 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 GMCL1Q96IK5 515 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 AGXT2Q9BYV1 514 aa17.29■□□□□ 0.36
PEF1-201ENST00000373703 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
PEF1-201ENST00000373703 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
PEF1-201ENST00000373703 KLF18A0A0U1RQI7 1052 aa17.28■□□□□ 0.36
PEF1-201ENST00000373703 GOLGA8HP0CJ92 632 aa17.28■□□□□ 0.36
PEF1-201ENST00000373703 SNHG28P0DPA3 235 aa17.28■□□□□ 0.36
PEF1-201ENST00000373703 CYP2C8P10632 490 aa17.28■□□□□ 0.36
PEF1-201ENST00000373703 HOXA7P31268 230 aaPredicted RBP17.28■□□□□ 0.36
PEF1-201ENST00000373703 TROAPQ12815 778 aa17.28■□□□□ 0.36
PEF1-201ENST00000373703 PABPC4Q13310 644 aaKnown RBP eCLIP17.28■□□□□ 0.36
PEF1-201ENST00000373703 RABEP1Q15276 862 aa17.28■□□□□ 0.36
PEF1-201ENST00000373703 SAMD1Q6SPF0 538 aaPredicted RBP17.28■□□□□ 0.36
PEF1-201ENST00000373703 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
PEF1-201ENST00000373703 CEP350Q5VT06 3117 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 TMEM232C9JQI7 657 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 AK2P54819 239 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 SYNE3Q6ZMZ3 975 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.36
PEF1-201ENST00000373703 MICU3Q86XE3 530 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 CCDC144CPQ8IYA2 1237 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 ASCC2Q9H1I8 757 aaPredicted RBP17.27■□□□□ 0.36
PEF1-201ENST00000373703 GPCPD1Q9NPB8 672 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 FBXO28Q9NVF7 368 aa17.27■□□□□ 0.36
PEF1-201ENST00000373703 THSD7BQ9C0I4 1608 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 FLOT1O75955 427 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 DDAH1O94760 285 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
PEF1-201ENST00000373703 OSBPP22059 807 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 IRX3P78415 501 aaPredicted RBP17.26■□□□□ 0.35
PEF1-201ENST00000373703 ZNF543Q08ER8 600 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 TTBK2Q6IQ55 1244 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 P2RX7Q99572 595 aaKnown RBP17.26■□□□□ 0.35
PEF1-201ENST00000373703 ALDH8A1Q9H2A2 487 aaPredicted RBP17.26■□□□□ 0.35
PEF1-201ENST00000373703 SLC45A1Q9Y2W3 748 aa17.26■□□□□ 0.35
PEF1-201ENST00000373703 IKQ13123 557 aaPredicted RBP17.25■□□□□ 0.35
PEF1-201ENST00000373703 TAF1CQ15572 869 aaPredicted RBP17.25■□□□□ 0.35
PEF1-201ENST00000373703 STAG2Q8N3U4 1231 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 MAD2L2Q9UI95 211 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 PNMA3Q9UL41 463 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 ZBTB43O43298 467 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 ALDH1A1P00352 501 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 SLC16A2P36021 539 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 COG2Q14746 738 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 GRM4Q14833 912 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 CPVLQ9H3G5 476 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 ZCCHC17Q9NP64 241 aaKnown RBP17.25■□□□□ 0.35
PEF1-201ENST00000373703 RNF186Q9NXI6 227 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 FEM1BQ9UK73 627 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 PCNTO95613 3336 aa17.25■□□□□ 0.35
PEF1-201ENST00000373703 GOLGA8BA8MQT2 603 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 TRPA1O75762 1119 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 CALM1P0DP23 149 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 CALM2P0DP24 149 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 CALM3P0DP25 149 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 STAT2P52630 851 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 MAP2K1Q02750 393 aaPredicted RBP17.24■□□□□ 0.35
PEF1-201ENST00000373703 ANKRD1Q15327 319 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 ASPRV1Q53RT3 343 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 GPATCH4Q5T3I0 446 aaKnown RBP17.24■□□□□ 0.35
PEF1-201ENST00000373703 FANCBQ8NB91 859 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 CTCFLQ8NI51 663 aaPredicted RBP17.24■□□□□ 0.35
PEF1-201ENST00000373703 SMCR8Q8TEV9 937 aaPredicted RBP17.24■□□□□ 0.35
PEF1-201ENST00000373703 KIFC2Q96AC6 838 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 PARK7Q99497 189 aaKnown RBP17.24■□□□□ 0.35
PEF1-201ENST00000373703 SLF1Q9BQI6 1058 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 TPCN1Q9ULQ1 816 aa17.24■□□□□ 0.35
PEF1-201ENST00000373703 PALM3A6NDB9 673 aaPredicted RBP17.23■□□□□ 0.35
PEF1-201ENST00000373703 PDIA3P30101 505 aaKnown RBP17.23■□□□□ 0.35
PEF1-201ENST00000373703 DSG3P32926 999 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 EVCP57679 992 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 HERVK_113P62684 666 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 CRHR2Q13324 411 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 CHURC1Q8WUH1 139 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 ZFYVE28Q9HCC9 887 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 HOXC10Q9NYD6 342 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 PPP1R9AQ9ULJ8 1098 aa17.23■□□□□ 0.35
PEF1-201ENST00000373703 SPDYE16A6NNV3 312 aaPredicted RBP17.22■□□□□ 0.35
PEF1-201ENST00000373703 GOLGA8AA7E2F4 631 aa17.22■□□□□ 0.35
PEF1-201ENST00000373703 KLRF2D3W0D1 207 aa17.22■□□□□ 0.35
PEF1-201ENST00000373703 CA12O43570 354 aa17.22■□□□□ 0.35
PEF1-201ENST00000373703 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
PEF1-201ENST00000373703 KIF5BP33176 963 aa17.22■□□□□ 0.35
PEF1-201ENST00000373703 METAP2P50579 478 aaKnown RBP eCLIP17.22■□□□□ 0.35
PEF1-201ENST00000373703 STK3Q13188 491 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms