RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 ZBED3Q96IU2 234 aaPredicted RBP18.04■□□□□ 0.48
HDAC8-209ENST00000373589 BARHL2Q9NY43 387 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 TMOD2Q9NZR1 351 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 PCDHB6Q9Y5E3 794 aa18.04■□□□□ 0.48
HDAC8-209ENST00000373589 A0A1B0GVL5 298 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
HDAC8-209ENST00000373589 FAM205CA6NFA0 338 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 MPHOSPH10O00566 681 aaKnown RBP18.03■□□□□ 0.48
HDAC8-209ENST00000373589 CTAGE5O15320 804 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 CCDC192P0DO97 292 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 FKBP1CQ5VVH2 108 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 WWC2Q6AWC2 1192 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 CIAPIN1Q6FI81 312 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 TYW1BQ6NUM6 668 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 GPKOWQ92917 476 aaPredicted RBP eCLIP18.03■□□□□ 0.481e-19■■■■■ 59.4
HDAC8-209ENST00000373589 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 BCS1LQ9Y276 419 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 FAM237AA0A1B0GTK4 181 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 STXBP3O00186 592 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 KINO60870 393 aaKnown RBP18.03■□□□□ 0.48
HDAC8-209ENST00000373589 CUTAO60888 179 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 CKAP2LQ8IYA6 745 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 FAM151AQ8WW52 585 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 MKL1Q969V6 931 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 TRIM34Q9BYJ4 488 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 CPVLQ9H3G5 476 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 NYAP2Q9P242 653 aa18.03■□□□□ 0.48
HDAC8-209ENST00000373589 CLRN2A0PK11 232 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 TCP10L2B9ZVM9 353 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 M0R2N6 131 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 ADAMTS3O15072 1205 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 NOM1Q5C9Z4 860 aaKnown RBP18.02■□□□□ 0.48
HDAC8-209ENST00000373589 GALNT17Q6IS24 598 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 SHC4Q6S5L8 630 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 KRI1Q8N9T8 703 aaKnown RBP18.02■□□□□ 0.48
HDAC8-209ENST00000373589 DAGLBQ8NCG7 672 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 RNF214Q8ND24 703 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 CSRNP1Q96S65 589 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 KANSL2Q9H9L4 492 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 PCDHA4Q9UN74 947 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 CEP131Q9UPN4 1083 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 HPSEQ9Y251 543 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 CNTNAP1P78357 1384 aa18.02■□□□□ 0.48
HDAC8-209ENST00000373589 TRIM75PA6NK02 468 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 PFKFB1P16118 471 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 PTPREP23469 700 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 MMP14P50281 582 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 ZNF543Q08ER8 600 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 SHROOM1Q2M3G4 852 aaPredicted RBP18.01■□□□□ 0.47
HDAC8-209ENST00000373589 RESP18Q5W5W9 173 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 TMEM179Q6ZVK1 233 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 BLIDQ8IZY5 108 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 CCDC148Q8NFR7 591 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 RRP36Q96EU6 259 aaKnown RBP18.01■□□□□ 0.47
HDAC8-209ENST00000373589 TRAPPC10P48553 1259 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 TYRO3Q06418 890 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 TNIP1Q15025 636 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 HEATR3Q7Z4Q2 680 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 SIAH1Q8IUQ4 282 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 CLIC6Q96NY7 704 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
HDAC8-209ENST00000373589 HERC5Q9UII4 1024 aaKnown RBP18.01■□□□□ 0.47
HDAC8-209ENST00000373589 FBXO2Q9UK22 296 aaPredicted RBP18.01■□□□□ 0.47
HDAC8-209ENST00000373589 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
HDAC8-209ENST00000373589 FRMPD2Q68DX3 1309 aaPredicted RBP18■□□□□ 0.47
HDAC8-209ENST00000373589 EEF2P13639 858 aaKnown RBP18■□□□□ 0.47
HDAC8-209ENST00000373589 MRVI1Q9Y6F6 885 aa18■□□□□ 0.47
HDAC8-209ENST00000373589 WNT7AO00755 349 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 ZNF202O95125 648 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 BMP15O95972 392 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 ATP2B1P20020 1258 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 RRP1BQ14684 758 aaKnown RBP17.99■□□□□ 0.47
HDAC8-209ENST00000373589 SEPT2Q15019 361 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 ABCB5Q2M3G0 1257 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 UVSSAQ2YD98 709 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 GPATCH4Q5T3I0 446 aaKnown RBP17.99■□□□□ 0.47
HDAC8-209ENST00000373589 PIK3AP1Q6ZUJ8 805 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 FAM83AQ86UY5 434 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 ZNF579Q8NAF0 562 aaKnown RBP17.99■□□□□ 0.47
HDAC8-209ENST00000373589 PIGSQ96S52 555 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 ZMYND12Q9H0C1 365 aa17.99■□□□□ 0.47
HDAC8-209ENST00000373589 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
HDAC8-209ENST00000373589 SRPRBQ9Y5M8 271 aaKnown RBP17.99■□□□□ 0.47
HDAC8-209ENST00000373589 hCG_1984214I3L0E3 225 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 WNT10BO00744 389 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 RPS12P25398 132 aaKnown RBP17.98■□□□□ 0.47
HDAC8-209ENST00000373589 PRELPP51888 382 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 ZNF280AP59817 542 aaPredicted RBP17.98■□□□□ 0.47
HDAC8-209ENST00000373589 JAG1P78504 1218 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 ZNF713Q8N859 430 aaPredicted RBP17.98■□□□□ 0.47
HDAC8-209ENST00000373589 NLGN2Q8NFZ4 835 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 CCDC12Q8WUD4 166 aaPredicted RBP17.98■□□□□ 0.47
HDAC8-209ENST00000373589 VAT1LQ9HCJ6 419 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 MYOZ2Q9NPC6 264 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 GDF11O95390 407 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 RASSF7Q02833 373 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 ICA1Q05084 483 aa17.98■□□□□ 0.47
HDAC8-209ENST00000373589 TTC38Q5R3I4 469 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms