RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 CFHR5Q9BXR6 569 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 FBXO28Q9NVF7 368 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 PNMA3Q9UL41 463 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 SYNPO2Q9UMS6 1093 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 MYH6P13533 1939 aa21.74■■□□□ 1.07
CDX4-201ENST00000373514 CCDC178Q5BJE1 867 aa21.74■■□□□ 1.07
CDX4-201ENST00000373514 TMEM67Q5HYA8 995 aa21.74■■□□□ 1.07
CDX4-201ENST00000373514 IFIT1BQ5T764 474 aaKnown RBP21.74■■□□□ 1.07
CDX4-201ENST00000373514 PNMA1Q8ND90 353 aa21.74■■□□□ 1.07
CDX4-201ENST00000373514 IGDCC4Q8TDY8 1250 aa21.74■■□□□ 1.07
CDX4-201ENST00000373514 SMCR8Q8TEV9 937 aaPredicted RBP21.74■■□□□ 1.07
CDX4-201ENST00000373514 KAT14Q9H8E8 782 aa21.74■■□□□ 1.07
CDX4-201ENST00000373514 ISY1Q9ULR0 285 aaKnown RBP21.74■■□□□ 1.07
CDX4-201ENST00000373514 SH2B2O14492 632 aaPredicted RBP21.73■■□□□ 1.07
CDX4-201ENST00000373514 TLR2O60603 784 aa21.73■■□□□ 1.07
CDX4-201ENST00000373514 CASTP20810 708 aaKnown RBP21.73■■□□□ 1.07
CDX4-201ENST00000373514 WTAPQ15007 396 aa21.73■■□□□ 1.07
CDX4-201ENST00000373514 KCTD1Q719H9 257 aa21.73■■□□□ 1.07
CDX4-201ENST00000373514 ANKS1AQ92625 1134 aa21.73■■□□□ 1.07
CDX4-201ENST00000373514 LY9Q9HBG7 655 aa21.73■■□□□ 1.07
CDX4-201ENST00000373514 FRMPD2Q68DX3 1309 aaPredicted RBP21.72■■□□□ 1.07
CDX4-201ENST00000373514 ERICH2A1L162 156 aa21.72■■□□□ 1.07
CDX4-201ENST00000373514 SPDYE16A6NNV3 312 aaPredicted RBP21.72■■□□□ 1.07
CDX4-201ENST00000373514 FLOT1O75955 427 aa21.72■■□□□ 1.07
CDX4-201ENST00000373514 RBM25P49756 843 aaKnown RBP21.72■■□□□ 1.07
CDX4-201ENST00000373514 HERVK_113P62684 666 aa21.72■■□□□ 1.07
CDX4-201ENST00000373514 CCDC96Q2M329 555 aa21.72■■□□□ 1.07
CDX4-201ENST00000373514 ECM2O94769 699 aaPredicted RBP21.71■■□□□ 1.07
CDX4-201ENST00000373514 PDHBP11177 359 aa21.71■■□□□ 1.07
CDX4-201ENST00000373514 SLC1A4P43007 532 aa21.71■■□□□ 1.07
CDX4-201ENST00000373514 LBX1P52954 281 aa21.71■■□□□ 1.07
CDX4-201ENST00000373514 EXOSC10Q01780 885 aaKnown RBP21.71■■□□□ 1.07
CDX4-201ENST00000373514 SART3Q15020 963 aaKnown RBP21.71■■□□□ 1.07
CDX4-201ENST00000373514 ANKRD13CQ8N6S4 541 aa21.71■■□□□ 1.07
CDX4-201ENST00000373514 GMCL1Q96IK5 515 aa21.71■■□□□ 1.07
CDX4-201ENST00000373514 PLXNB2O15031 1838 aa21.71■■□□□ 1.07
CDX4-201ENST00000373514 GPR25O00155 361 aa21.7■■□□□ 1.07
CDX4-201ENST00000373514 BMP3P12645 472 aa21.7■■□□□ 1.07
CDX4-201ENST00000373514 BLOC1S2Q6QNY1 142 aa21.7■■□□□ 1.07
CDX4-201ENST00000373514 DHX32Q7L7V1 743 aaKnown RBP21.7■■□□□ 1.07
CDX4-201ENST00000373514 ATG4CQ96DT6 458 aa21.7■■□□□ 1.07
CDX4-201ENST00000373514 MYL10Q9BUA6 226 aa21.7■■□□□ 1.07
CDX4-201ENST00000373514 UPF3BQ9BZI7 483 aaKnown RBP21.7■■□□□ 1.07
CDX4-201ENST00000373514 TXNRD2Q9NNW7 524 aa21.7■■□□□ 1.07
CDX4-201ENST00000373514 TMEM232C9JQI7 657 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 GOLGA8HP0CJ92 632 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 BCRP11274 1271 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 CTCFP49711 727 aaPredicted RBP21.7■■□□□ 1.06
CDX4-201ENST00000373514 CAP1Q01518 475 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 C17orf99Q6UX52 265 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 DCAF4Q8WV16 495 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 TMEM87BQ96K49 555 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 PAGR1Q9BTK6 254 aa21.7■■□□□ 1.06
CDX4-201ENST00000373514 WDR19Q8NEZ3 1342 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 SMCHD1A6NHR9 2005 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 CNMDO75829 334 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 SNHG28P0DPA3 235 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 RPS6KB1P23443 525 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 TTBK2Q6IQ55 1244 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 RAB11FIP4Q86YS3 637 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 ZNF296Q8WUU4 475 aaPredicted RBP21.69■■□□□ 1.06
CDX4-201ENST00000373514 GPCPD1Q9NPB8 672 aa21.69■■□□□ 1.06
CDX4-201ENST00000373514 DOCK3Q8IZD9 2030 aa21.68■■□□□ 1.06
CDX4-201ENST00000373514 DSG3P32926 999 aa21.68■■□□□ 1.06
CDX4-201ENST00000373514 SLF1Q9BQI6 1058 aa21.68■■□□□ 1.06
CDX4-201ENST00000373514 CPVLQ9H3G5 476 aa21.68■■□□□ 1.06
CDX4-201ENST00000373514 BTBD7Q9P203 1132 aa21.68■■□□□ 1.06
CDX4-201ENST00000373514 PPP1R9AQ9ULJ8 1098 aa21.68■■□□□ 1.06
CDX4-201ENST00000373514 HMGB1P09429 215 aaKnown RBP21.67■■□□□ 1.06
CDX4-201ENST00000373514 SLC16A2P36021 539 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 ZNF543Q08ER8 600 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 COG2Q14746 738 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 NFXL1Q6ZNB6 911 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 Q6ZUG5 572 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 ZNF654Q8IZM8 581 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 MTA3Q9BTC8 594 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 ARHGAP39Q9C0H5 1083 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 ZSWIM6Q9HCJ5 1215 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 RBPJLQ9UBG7 517 aa21.67■■□□□ 1.06
CDX4-201ENST00000373514 RXRAP19793 462 aa21.66■■□□□ 1.06
CDX4-201ENST00000373514 PSMA5P28066 241 aa21.66■■□□□ 1.06
CDX4-201ENST00000373514 STAT2P52630 851 aa21.66■■□□□ 1.06
CDX4-201ENST00000373514 IKQ13123 557 aaPredicted RBP21.66■■□□□ 1.06
CDX4-201ENST00000373514 RUFY3Q7L099 469 aa21.66■■□□□ 1.06
CDX4-201ENST00000373514 KIFC2Q96AC6 838 aa21.66■■□□□ 1.06
CDX4-201ENST00000373514 MYPNQ86TC9 1320 aa21.66■■□□□ 1.06
CDX4-201ENST00000373514 RBBP6Q7Z6E9 1792 aaKnown RBP21.66■■□□□ 1.06
CDX4-201ENST00000373514 CTGFP29279 349 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 GCLCP48506 637 aaPredicted RBP21.65■■□□□ 1.06
CDX4-201ENST00000373514 ANAPC15P60006 121 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 FAM110CQ1W6H9 321 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 LBX2Q6XYB7 198 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 STAG2Q8N3U4 1231 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 CD99L2Q8TCZ2 262 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 FEM1BQ9UK73 627 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 BAZ2BQ9UIF8 2168 aaKnown RBP21.65■■□□□ 1.06
CDX4-201ENST00000373514 CCDC69A6NI79 296 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 LIFRP42702 1097 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 SNAP25P60880 206 aa21.65■■□□□ 1.06
CDX4-201ENST00000373514 SP3Q02447 781 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms