RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 TNPO2O14787 897 aaKnown RBP21.56■■□□□ 1.04
PBX3-205ENST00000373492 WDR46O15213 610 aaKnown RBP21.56■■□□□ 1.04
PBX3-205ENST00000373492 ECM2O94769 699 aaPredicted RBP21.56■■□□□ 1.04
PBX3-205ENST00000373492 HSPA4P34932 840 aa21.56■■□□□ 1.04
PBX3-205ENST00000373492 COG2Q14746 738 aa21.56■■□□□ 1.04
PBX3-205ENST00000373492 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
PBX3-205ENST00000373492 LRRC47Q8N1G4 583 aaKnown RBP21.56■■□□□ 1.04
PBX3-205ENST00000373492 ZSCAN10Q96SZ4 725 aaPredicted RBP21.56■■□□□ 1.04
PBX3-205ENST00000373492 TXNRD2Q9NNW7 524 aa21.56■■□□□ 1.04
PBX3-205ENST00000373492 RABGAP1Q9Y3P9 1069 aa21.56■■□□□ 1.04
PBX3-205ENST00000373492 ERICH2A1L162 156 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 TOP1P11387 765 aaKnown RBP21.55■■□□□ 1.04
PBX3-205ENST00000373492 NOVP48745 357 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 ERVK-9P63128 1117 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 ERVK-24P63145 666 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 SART3Q15020 963 aaKnown RBP21.55■■□□□ 1.04
PBX3-205ENST00000373492 TSGA10IPQ3SY00 556 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 NBPF11Q86T75 865 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 DGKHQ86XP1 1220 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 GMCL1P1Q8NEA9 526 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 COA7Q96BR5 231 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 ARMC5Q96C12 935 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 USP26Q9BXU7 913 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 TANGO6Q9C0B7 1094 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 ZSWIM8A7E2V4 1837 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 TNKSO95271 1327 aa21.55■■□□□ 1.04
PBX3-205ENST00000373492 HTTP42858 3142 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 SPDYE16A6NNV3 312 aaPredicted RBP21.54■■□□□ 1.04
PBX3-205ENST00000373492 F5H6K3 240 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 PRKCZQ05513 592 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 KLRC3Q07444 240 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 SLC9C1Q4G0N8 1177 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 POTEEQ6S8J3 1075 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 CYB5R4Q7L1T6 521 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 NKX2-3Q8TAU0 364 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 RAET1EQ8TD07 263 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 A0A0G2JMZ2 1700 aa21.54■■□□□ 1.04
PBX3-205ENST00000373492 NDUFB10O96000 172 aa21.53■■□□□ 1.04
PBX3-205ENST00000373492 MCM5P33992 734 aa21.53■■□□□ 1.04
PBX3-205ENST00000373492 Q3C1V9 767 aa21.53■■□□□ 1.04
PBX3-205ENST00000373492 MB21D2Q8IYB1 491 aaPredicted RBP21.53■■□□□ 1.04
PBX3-205ENST00000373492 TMEM47Q9BQJ4 181 aa21.53■■□□□ 1.04
PBX3-205ENST00000373492 PAGR1Q9BTK6 254 aa21.53■■□□□ 1.04
PBX3-205ENST00000373492 DOCK3Q8IZD9 2030 aa21.53■■□□□ 1.04
PBX3-205ENST00000373492 IFIT3O14879 490 aaKnown RBP21.52■■□□□ 1.04
PBX3-205ENST00000373492 CNMDO75829 334 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 FLOT1O75955 427 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 MAPK4P31152 587 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 CCNA1P78396 465 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 SLFN13Q68D06 897 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 RCSD1Q6JBY9 416 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 RASEFQ8IZ41 740 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 MB21D1Q8N884 522 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 ENAHQ8N8S7 591 aaPredicted RBP21.52■■□□□ 1.04
PBX3-205ENST00000373492 KCNB2Q92953 911 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 NEK1Q96PY6 1258 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 KAT14Q9H8E8 782 aa21.52■■□□□ 1.04
PBX3-205ENST00000373492 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
PBX3-205ENST00000373492 HMGB1P09429 215 aaKnown RBP21.51■■□□□ 1.03
PBX3-205ENST00000373492 DSG3P32926 999 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 FLT3LGP49771 235 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 IRF5Q13568 498 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 C8orf34Q49A92 452 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 FAM83BQ5T0W9 1011 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 IFIT1BQ5T764 474 aaKnown RBP21.51■■□□□ 1.03
PBX3-205ENST00000373492 CCAR1Q8IX12 1150 aaKnown RBP21.51■■□□□ 1.03
PBX3-205ENST00000373492 MTA3Q9BTC8 594 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 ISY1Q9ULR0 285 aaKnown RBP21.51■■□□□ 1.03
PBX3-205ENST00000373492 GABRQQ9UN88 632 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 SNX14Q9Y5W7 946 aa21.51■■□□□ 1.03
PBX3-205ENST00000373492 PEX10O60683 326 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 SLC1A4P43007 532 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 WTAPQ15007 396 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 CHST3Q7LGC8 479 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 ANKS1AQ92625 1134 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 GMCL1Q96IK5 515 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 ZNF333Q96JL9 665 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 BTBD7Q9P203 1132 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 MTMR7Q9Y216 660 aa21.5■■□□□ 1.03
PBX3-205ENST00000373492 PRC1O43663 620 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 BMP3P12645 472 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 GRK4P32298 578 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 SEC23AQ15436 765 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 SLAIN1Q8ND83 568 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 PNMA1Q8ND90 353 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 DCAF4Q8WV16 495 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 TMEM87BQ96K49 555 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 GJD2Q9UKL4 321 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 ADAMTS5Q9UNA0 930 aa21.49■■□□□ 1.03
PBX3-205ENST00000373492 PLXNB2O15031 1838 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 PSMA5P28066 241 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 RGS19P49795 217 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 ANTXR2P58335 489 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 ADCK5Q3MIX3 580 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 TMEM67Q5HYA8 995 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 PXYLP1Q8TE99 480 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 NUP88Q99567 741 aaPredicted RBP21.48■■□□□ 1.03
PBX3-205ENST00000373492 PORCNQ9H237 461 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 FEM1BQ9UK73 627 aa21.48■■□□□ 1.03
PBX3-205ENST00000373492 PPP1R9AQ9ULJ8 1098 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms