RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 SYF2O95926 243 aaKnown RBP16.69■□□□□ 0.26
COL9A2-202ENST00000372748 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 CCDC51Q96ER9 411 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 MMS19Q96T76 1030 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 ABCF2Q9UG63 623 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 REXO2Q9Y3B8 237 aaKnown RBP16.69■□□□□ 0.26
COL9A2-202ENST00000372748 LRP6O75581 1613 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 RPS6KA5O75582 802 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 SH3RF1Q7Z6J0 888 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 MSL3Q8N5Y2 521 aaKnown RBP16.69■□□□□ 0.26
COL9A2-202ENST00000372748 GSDMAQ96QA5 445 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 KRT23Q9C075 422 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 MED4Q9NPJ6 270 aa16.69■□□□□ 0.26
COL9A2-202ENST00000372748 ERICH2A1L162 156 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 PES1O00541 588 aaKnown RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 ADAMTS2O95450 1211 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 MAGEA9P43362 315 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 ATP1A1P05023 1023 aaKnown RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 COPB1P53618 953 aaKnown RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 TUBB4BP68371 445 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 SART3Q15020 963 aaKnown RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 TTC31Q49AM3 519 aaPredicted RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 WDR93Q6P2C0 686 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 ADGRA1Q86SQ6 560 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 ZNF654Q8IZM8 581 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 AFAP1L1Q8TED9 768 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 NACAP1Q9BZK3 213 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 MKRN1Q9UHC7 482 aaKnown RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 EPN1Q9Y6I3 576 aaPredicted RBP16.68■□□□□ 0.26
COL9A2-202ENST00000372748 MYH8P13535 1937 aa16.68■□□□□ 0.26
COL9A2-202ENST00000372748 FECHP22830 423 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 ITIH6Q6UXX5 1313 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 NDUFA10O95299 355 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 UBXN1Q04323 297 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 XDHP47989 1333 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 KCNJ18B7U540 433 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 CYP7A1P22680 504 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 IGHMBP2P38935 993 aaKnown RBP16.67■□□□□ 0.26
COL9A2-202ENST00000372748 USP14P54578 494 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 KCNJ12Q14500 433 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 RABEP2Q9H5N1 569 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 MYO1AQ9UBC5 1043 aa16.67■□□□□ 0.26
COL9A2-202ENST00000372748 EIF5P55010 431 aaKnown RBP16.66■□□□□ 0.26
COL9A2-202ENST00000372748 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
COL9A2-202ENST00000372748 TRAPPC11Q7Z392 1133 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 STAG1Q8WVM7 1258 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 LIMA1Q9UHB6 759 aaKnown RBP16.66■□□□□ 0.26
COL9A2-202ENST00000372748 HPCAL4Q9UM19 191 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 NIP7Q9Y221 180 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL9A2-202ENST00000372748 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 CYP2D7A0A087X1C5 515 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 CCDC196A0A1B0GTZ2 297 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 TTC26A0AVF1 554 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 SEMA3EO15041 775 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 MYBL2P10244 700 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 CHRNDQ07001 517 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 TCP11X2Q5H9J9 407 aa16.66■□□□□ 0.26
COL9A2-202ENST00000372748 UBAP1LF5GYI3 381 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 PRPF6O94906 941 aaKnown RBP16.65■□□□□ 0.26
COL9A2-202ENST00000372748 GGCXP38435 758 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 CRKLP46109 303 aaKnown RBP16.65■□□□□ 0.26
COL9A2-202ENST00000372748 CORO7P57737 925 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 PPARAQ07869 468 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 CCDC122Q5T0U0 273 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 EEF2KMTQ96G04 330 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 MTRQ99707 1265 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 UBAC1Q9BSL1 405 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 V9GY48 417 aaPredicted RBP16.65■□□□□ 0.26
COL9A2-202ENST00000372748 GYG1P46976 350 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 GTF2A1P52655 376 aaPredicted RBP16.65■□□□□ 0.26
COL9A2-202ENST00000372748 PAK1Q13153 545 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 CT47A1Q5JQC4 288 aaPredicted RBP16.65■□□□□ 0.26
COL9A2-202ENST00000372748 SMARCC1Q92922 1105 aaPredicted RBP16.65■□□□□ 0.26
COL9A2-202ENST00000372748 SAR1BQ9Y6B6 198 aa16.65■□□□□ 0.26
COL9A2-202ENST00000372748 TRIM49BA6NDI0 452 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 ZNF185O15231 689 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 PPFIA4O75335 1185 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 TUBBP07437 444 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 KRT2P35908 639 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 PTGDRQ13258 359 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 ICE2Q659A1 982 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 CHD4Q14839 1912 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 STIM1Q13586 685 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 PKN1Q16512 942 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
COL9A2-202ENST00000372748 ANKRD20A12PQ8NF67 263 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 COG1Q8WTW3 980 aa16.63■□□□□ 0.25
COL9A2-202ENST00000372748 JRKLQ9Y4A0 524 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms