RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 OR8K1Q8NGG5 319 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 CCDC169A6NNP5 214 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 KCNJ18B7U540 433 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 KCNJ12Q14500 433 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 C6orf163Q5TEZ5 329 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 C8orf74Q6P047 294 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 BIRC3Q13489 604 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 IFT20Q8IY31 132 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 MYCT1Q8N699 235 aa11.65□□□□□ -0.54
NUP188-201ENST00000372577 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.65□□□□□ -0.54
NUP188-201ENST00000372577 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.55
NUP188-201ENST00000372577 DYMQ7RTS9 669 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 KRT26Q7Z3Y9 468 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 MRPL44Q9H9J2 332 aaKnown RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 BIN2Q9UBW5 565 aaPredicted RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PTPRMP28827 1452 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 NDUFA8P51970 172 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PPP1R7Q15435 360 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 MCF2L2Q86YR7 1114 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 FAM76AQ8TAV0 307 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PIGBQ92521 554 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 H0YCG3 227 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 OTUD6AQ7L8S5 288 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 RGS22Q8NE09 1264 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PXDNLA1KZ92 1463 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 CAPN2P17655 700 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 KLHL30Q0D2K2 578 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PCDHA4Q9UN74 947 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PCDHA12Q9UN75 941 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 CLIC4Q9Y696 253 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PSDA5PKW4 1024 aaPredicted RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 N4BP1O75113 896 aaKnown RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 GCNT3O95395 438 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 CFBP00751 764 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 BAG6P46379 1132 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 KIF23Q02241 960 aaPredicted RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 WHAMMP3Q1A5X7 153 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 FAM196AQ6ZSG2 479 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 GPR161Q8N6U8 529 aaKnown RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 GIMAP7Q8NHV1 300 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 PPP1R14CQ8TAE6 165 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 BSDC1Q9NW68 430 aaPredicted RBP11.64□□□□□ -0.55
NUP188-201ENST00000372577 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
NUP188-201ENST00000372577 SPOPO43791 374 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 EXOC3O60645 756 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 GAS7O60861 476 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 GCFC2P16383 781 aaKnown RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 TTLL11Q8NHH1 800 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 IFT81Q8WYA0 676 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 OSBP2Q969R2 916 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 METTL14Q9HCE5 456 aaKnown RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 hCG_1642624A0A1W2PR95 340 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 CYP27B1O15528 508 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 RCAN1P53805 252 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 TCP10Q12799 353 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 DCAF15Q66K64 600 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 FBXO11Q86XK2 927 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 CCDC24Q8N4L8 307 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 MAIP1Q8WWC4 291 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.63□□□□□ -0.55
NUP188-201ENST00000372577 CARD6Q9BX69 1037 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 FRMPD1Q5SYB0 1578 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 RPN1P04843 607 aaKnown RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 KRT5P13647 590 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 PLCB3Q01970 1234 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 INF2Q27J81 1249 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 USH1GQ495M9 461 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 USP32Q8NFA0 1604 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 PPEF1O14829 653 aaPredicted RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 PRPF3O43395 683 aaKnown RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 POLR2MP0CAP2 368 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 CFAP221Q4G0U5 840 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
NUP188-201ENST00000372577 TRIM58Q8NG06 486 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 FAM212AQ96EL1 285 aa11.63□□□□□ -0.55
NUP188-201ENST00000372577 PLEKHG2Q9H7P9 1386 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 MMP1P03956 469 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 PTGDRQ13258 359 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 C2CD5Q86YS7 1000 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 ALDH8A1Q9H2A2 487 aaPredicted RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 VPS18Q9P253 973 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 NEURL4Q96JN8 1562 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 EBAG9O00559 213 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 IGKV5-2P06315 115 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 ICA1Q05084 483 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 GNPTABQ3T906 1256 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 GPBP1Q86WP2 473 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 DHX37Q8IY37 1157 aaKnown RBP11.62□□□□□ -0.55
NUP188-201ENST00000372577 LINC00301Q8NCQ3 95 aa11.62□□□□□ -0.55
NUP188-201ENST00000372577 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms