RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 DHX16O60231 1041 aaKnown RBP13.09□□□□□ -0.31
TSPAN1-201ENST00000372003 ARMCX5Q6P1M9 558 aa13.09□□□□□ -0.31
TSPAN1-201ENST00000372003 LINC00301Q8NCQ3 95 aa13.09□□□□□ -0.31
TSPAN1-201ENST00000372003 ZNF446Q9NWS9 450 aa13.09□□□□□ -0.31
TSPAN1-201ENST00000372003 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
TSPAN1-201ENST00000372003 DOCK2Q92608 1830 aa13.08□□□□□ -0.31
TSPAN1-201ENST00000372003 EFCAB8A8MWE9 144 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 CELF2O95319 508 aaKnown RBP13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 STOX1Q6ZVD7 989 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 SH3BP5LQ7L8J4 393 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 TEPSINQ96N21 525 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 XPO4Q9C0E2 1151 aaKnown RBP13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 TMX1Q9H3N1 280 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 DCP1AQ9NPI6 582 aaPredicted RBP13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 DNAI1Q9UI46 699 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 FZD1Q9UP38 647 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 PPP2R3BQ9Y5P8 575 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 FHOD1Q9Y613 1164 aa13.08□□□□□ -0.32
TSPAN1-201ENST00000372003 GSG1L2A8MUP6 293 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 SLC3A2P08195 630 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 SLURP2P0DP57 97 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 GNAT2P19087 354 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 CMA1P23946 247 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 PDIA3P30101 505 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 CLCN6P51797 869 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 SUPT20HL1Q3ZLR7 823 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 TMCO3Q6UWJ1 677 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 MIGA2Q7L4E1 593 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 ELOA2Q8IYF1 753 aaPredicted RBP13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 UBXN4Q92575 508 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 CSRNP1Q96S65 589 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 IFNKQ9P0W0 207 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 WDR19Q8NEZ3 1342 aa13.07□□□□□ -0.32
TSPAN1-201ENST00000372003 TULP2O00295 520 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 ZSCAN12O43309 604 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 SMC2O95347 1197 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 PNMA6AP0CW24 399 aaPredicted RBP13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 NF2P35240 595 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 NCAPHQ15003 741 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 STK38Q15208 465 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 SF3A1Q15459 793 aaKnown RBP13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 ERCC6LQ2NKX8 1250 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 SYT10Q6XYQ8 523 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 ORC3Q9UBD5 711 aaPredicted RBP13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 V9GYY5 206 aaPredicted RBP13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 PASKQ96RG2 1323 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 CYP2D7A0A087X1C5 515 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 FAM237AA0A1B0GTK4 181 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 USP17L21D6R901 530 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 SPTLC2O15270 562 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 CYP2D6P10635 497 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 TDO2P48775 406 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 APOBRQ0VD83 1088 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 DPCR1Q3MIW9 517 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 CST9Q5W186 159 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 IFNL3Q8IZI9 196 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 UBXN6Q9BZV1 441 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 MKRN1Q9UHC7 482 aaKnown RBP13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 TUBE1Q9UJT0 475 aa13.06□□□□□ -0.32
TSPAN1-201ENST00000372003 NEDD4P46934 1319 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 FAM196BA6NMK8 535 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 MINDY4BA8MYZ0 360 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 E7EWF7 191 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 HSPD1P10809 573 aaKnown RBP13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 PLCD1P51178 756 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 NDUFA8P51970 172 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 FANCCQ00597 558 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 EVX2Q03828 476 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 ARHGAP29Q52LW3 1261 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 MOB2Q70IA6 237 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 STK11IPQ8N1F8 1099 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 TXLNBQ8N3L3 684 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 NAPBQ9H115 298 aa13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 DHX36Q9H2U1 1008 aaKnown RBP13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 EPB41L4AQ9HCS5 686 aaPredicted RBP13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.05□□□□□ -0.32
TSPAN1-201ENST00000372003 SMIM22K7EJ46 135 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 FOXP2O15409 715 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 PPP1R12BO60237 982 aaPredicted RBP13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 TADA3O75528 432 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 ZNF202O95125 648 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 HLA-DOAP06340 250 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 PLA2G4AP47712 749 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 TUBB4BP68371 445 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
TSPAN1-201ENST00000372003 AMOTL1Q8IY63 956 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms