RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 SLC15A5A6NIM6 579 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 SMIM22K7EJ46 135 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 SMARCA5O60264 1052 aaPredicted RBP17.7■□□□□ 0.42
LMO4-201ENST00000370542 PTPREP23469 700 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 TERF1P54274 439 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 CACNB2Q08289 660 aaPredicted RBP17.7■□□□□ 0.42
LMO4-201ENST00000370542 COG2Q14746 738 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 KIAA1755Q5JYT7 1200 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 C16orf86Q6ZW13 317 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 DIS3LQ8TF46 1054 aaKnown RBP17.7■□□□□ 0.42
LMO4-201ENST00000370542 LPAR1Q92633 364 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 DYNLL2Q96FJ2 89 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 PUS7LQ9H0K6 701 aaKnown RBP17.7■□□□□ 0.42
LMO4-201ENST00000370542 HOXC10Q9NYD6 342 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 RAPGEFL1Q9UHV5 662 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 TMX2Q9Y320 296 aa17.7■□□□□ 0.42
LMO4-201ENST00000370542 USP17L12C9JPN9 530 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 USP17L21D6R901 530 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 SEC24BO95487 1268 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 AKR1B1P15121 316 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 ZKSCAN1P17029 563 aaPredicted RBP17.69■□□□□ 0.42
LMO4-201ENST00000370542 CDK8P49336 464 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 GRB14Q14449 540 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 CCL14Q16627 93 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 LHX8Q68G74 356 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 TRIM44Q96DX7 344 aaPredicted RBP17.69■□□□□ 0.42
LMO4-201ENST00000370542 PKNOX2Q96KN3 472 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 C22orf23Q9BZE7 217 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
LMO4-201ENST00000370542 GRPEL1Q9HAV7 217 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 A0A0G2JMZ2 1700 aa17.69■□□□□ 0.42
LMO4-201ENST00000370542 MYH8P13535 1937 aa17.68■□□□□ 0.42
LMO4-201ENST00000370542 GLRX3O76003 335 aaKnown RBP17.68■□□□□ 0.42
LMO4-201ENST00000370542 SYN1P17600 705 aa17.68■□□□□ 0.42
LMO4-201ENST00000370542 GIMAP6Q6P9H5 292 aa17.68■□□□□ 0.42
LMO4-201ENST00000370542 CTR9Q6PD62 1173 aa17.68■□□□□ 0.42
LMO4-201ENST00000370542 CCAR1Q8IX12 1150 aaKnown RBP17.68■□□□□ 0.42
LMO4-201ENST00000370542 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
LMO4-201ENST00000370542 SYMPKQ92797 1274 aaKnown RBP17.68■□□□□ 0.42
LMO4-201ENST00000370542 STRBPQ96SI9 672 aaKnown RBP17.68■□□□□ 0.42
LMO4-201ENST00000370542 NBPF3Q9H094 633 aa17.68■□□□□ 0.42
LMO4-201ENST00000370542 CYP2D7A0A087X1C5 515 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 ESPNB1AK53 854 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 MPHOSPH10O00566 681 aaKnown RBP17.67■□□□□ 0.42
LMO4-201ENST00000370542 COL6A1P12109 1028 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 HDAC1Q13547 482 aaPredicted RBP17.67■□□□□ 0.42
LMO4-201ENST00000370542 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 MB21D1Q8N884 522 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 SHCBP1Q8NEM2 672 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 VCPKMTQ9H867 229 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 FLRT1Q9NZU1 646 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 ADAMTS5Q9UNA0 930 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 SLC4A4Q9Y6R1 1079 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 ZNF236Q9UL36 1845 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 DNAH12Q6ZR08 3092 aa17.67■□□□□ 0.42
LMO4-201ENST00000370542 STRNO43815 780 aa17.66■□□□□ 0.42
LMO4-201ENST00000370542 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
LMO4-201ENST00000370542 DSG3P32926 999 aa17.66■□□□□ 0.42
LMO4-201ENST00000370542 MOV10L1Q9BXT6 1211 aaKnown RBP17.66■□□□□ 0.42
LMO4-201ENST00000370542 SPATC1LQ9H0A9 340 aa17.66■□□□□ 0.42
LMO4-201ENST00000370542 GREB1LQ9C091 1923 aaPredicted RBP17.66■□□□□ 0.42
LMO4-201ENST00000370542 PARP14Q460N5 1801 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 GSG1L2A8MUP6 293 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 CCND3P30281 292 aaPredicted RBP17.65■□□□□ 0.42
LMO4-201ENST00000370542 ICA1Q05084 483 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 AMOTL1Q8IY63 956 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 OSBP2Q969R2 916 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.65■□□□□ 0.42
LMO4-201ENST00000370542 SH2D4AQ9H788 454 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 ARHGEF10LQ9HCE6 1279 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 ARPP21Q9UBL0 812 aaPredicted RBP17.65■□□□□ 0.42
LMO4-201ENST00000370542 PFASO15067 1338 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 ROBO3Q96MS0 1386 aa17.65■□□□□ 0.42
LMO4-201ENST00000370542 WDR46O15213 610 aaKnown RBP17.64■□□□□ 0.41
LMO4-201ENST00000370542 ZFYP08048 801 aaPredicted RBP17.64■□□□□ 0.41
LMO4-201ENST00000370542 CLEC10AQ8IUN9 316 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 SMC5Q8IY18 1101 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 ABRAQ8N0Z2 381 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 MAFAQ8NHW3 353 aaPredicted RBP17.64■□□□□ 0.41
LMO4-201ENST00000370542 NPLOC4Q8TAT6 608 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 APPBP2Q92624 585 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 ANP32BQ92688 251 aaKnown RBP17.64■□□□□ 0.41
LMO4-201ENST00000370542 FAM122AQ96E09 287 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 FAM161BQ96MY7 647 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 C11orf49Q9H6J7 331 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 PCDHB15Q9Y5E8 787 aa17.64■□□□□ 0.41
LMO4-201ENST00000370542 EEF2P13639 858 aaKnown RBP17.63■□□□□ 0.41
LMO4-201ENST00000370542 RBM25P49756 843 aaKnown RBP17.63■□□□□ 0.41
LMO4-201ENST00000370542 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
LMO4-201ENST00000370542 MFSD14CQ5VZR4 134 aa17.63■□□□□ 0.41
LMO4-201ENST00000370542 OLFML2BQ68BL8 750 aa17.63■□□□□ 0.41
LMO4-201ENST00000370542 MAP7D2Q96T17 732 aa17.63■□□□□ 0.41
LMO4-201ENST00000370542 CDX2Q99626 313 aaPredicted RBP17.63■□□□□ 0.41
LMO4-201ENST00000370542 TANGO6Q9C0B7 1094 aa17.63■□□□□ 0.41
LMO4-201ENST00000370542 IVNS1ABPQ9Y6Y0 642 aa17.63■□□□□ 0.41
LMO4-201ENST00000370542 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
LMO4-201ENST00000370542 GOLGA6L22H0YM25 854 aa17.62■□□□□ 0.41
LMO4-201ENST00000370542 TNFRSF10AO00220 468 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 281.9 ms