RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 CLIP2Q9UDT6 1046 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 ZNF112Q9UJU3 913 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 USP2O75604 605 aaPredicted RBP19.99■□□□□ 0.79
UBE3D-203ENST00000369747 TTLL1O95922 423 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 EEF2P13639 858 aaKnown RBP19.99■□□□□ 0.79
UBE3D-203ENST00000369747 TROAPQ12815 778 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 PNMA1Q8ND90 353 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 NUP62CLQ9H1M0 184 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 KAT14Q9H8E8 782 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 KANSL2Q9H9L4 492 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 DACT1Q9NYF0 836 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 ATAD5Q96QE3 1844 aa19.99■□□□□ 0.79
UBE3D-203ENST00000369747 CTNND1O60716 968 aaKnown RBP19.98■□□□□ 0.79
UBE3D-203ENST00000369747 ICA1Q05084 483 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 RASGRP2Q7LDG7 609 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 LRRC47Q8N1G4 583 aaKnown RBP19.98■□□□□ 0.79
UBE3D-203ENST00000369747 NUP133Q8WUM0 1156 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 GPBP1L1Q9HC44 474 aaPredicted RBP19.98■□□□□ 0.79
UBE3D-203ENST00000369747 RRAGDQ9NQL2 400 aaPredicted RBP19.98■□□□□ 0.79
UBE3D-203ENST00000369747 MTMR7Q9Y216 660 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 ASNSP08243 561 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 CPLX2Q6PUV4 134 aaKnown RBP19.98■□□□□ 0.79
UBE3D-203ENST00000369747 CATIPQ7Z7H3 387 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 BICD2Q8TD16 824 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 PHKBQ93100 1093 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 TRIM44Q96DX7 344 aaPredicted RBP19.98■□□□□ 0.79
UBE3D-203ENST00000369747 AIFM3Q96NN9 605 aa19.98■□□□□ 0.79
UBE3D-203ENST00000369747 DDX19AQ9NUU7 478 aaKnown RBP19.98■□□□□ 0.79
UBE3D-203ENST00000369747 MYH4Q9Y623 1939 aa19.97■□□□□ 0.79
UBE3D-203ENST00000369747 NR1I2O75469 434 aa19.97■□□□□ 0.79
UBE3D-203ENST00000369747 TOP1P11387 765 aaKnown RBP19.97■□□□□ 0.79
UBE3D-203ENST00000369747 SYNE3Q6ZMZ3 975 aa19.97■□□□□ 0.79
UBE3D-203ENST00000369747 MOB2Q70IA6 237 aa19.97■□□□□ 0.79
UBE3D-203ENST00000369747 ALG1Q9BT22 464 aa19.97■□□□□ 0.79
UBE3D-203ENST00000369747 MYH6P13533 1939 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 KIF28PB7ZC32 967 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 PPP1R12BO60237 982 aaPredicted RBP19.96■□□□□ 0.79
UBE3D-203ENST00000369747 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.96■□□□□ 0.79
UBE3D-203ENST00000369747 A0A1W2PRG0 241 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 KIF23Q02241 960 aaPredicted RBP19.96■□□□□ 0.79
UBE3D-203ENST00000369747 CAMK4Q16566 473 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 MAP3K11Q16584 847 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 BRAPQ7Z569 592 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 FANCBQ8NB91 859 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 CLSTN2Q9H4D0 955 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 RTEL1Q9NZ71 1219 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 NYAP2Q9P242 653 aa19.96■□□□□ 0.79
UBE3D-203ENST00000369747 NF2P35240 595 aa19.95■□□□□ 0.78
UBE3D-203ENST00000369747 ECE1P42892 770 aa19.95■□□□□ 0.78
UBE3D-203ENST00000369747 UVSSAQ2YD98 709 aa19.95■□□□□ 0.78
UBE3D-203ENST00000369747 RBM43Q6ZSC3 357 aaKnown RBP19.95■□□□□ 0.78
UBE3D-203ENST00000369747 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.95■□□□□ 0.78
UBE3D-203ENST00000369747 ACER1Q8TDN7 264 aa19.95■□□□□ 0.78
UBE3D-203ENST00000369747 ZNF408Q9H9D4 720 aa19.95■□□□□ 0.78
UBE3D-203ENST00000369747 STK36Q9NRP7 1315 aa19.95■□□□□ 0.78
UBE3D-203ENST00000369747 MYSM1Q5VVJ2 828 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 SCYL3Q8IZE3 742 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 MKL1Q969V6 931 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 DOCK1Q14185 1865 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 DDAH1O94760 285 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 IFNAR1P17181 557 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 TTLL12Q14166 644 aaPredicted RBP19.94■□□□□ 0.78
UBE3D-203ENST00000369747 KRT40Q6A162 431 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 CMTR1Q8N1G2 835 aaKnown RBP19.94■□□□□ 0.78
UBE3D-203ENST00000369747 TNMDQ9H2S6 317 aa19.94■□□□□ 0.78
UBE3D-203ENST00000369747 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.94■□□□□ 0.78
UBE3D-203ENST00000369747 OTOFQ9HC10 1997 aa19.93■□□□□ 0.78
UBE3D-203ENST00000369747 FMNL1O95466 1100 aaPredicted RBP19.93■□□□□ 0.78
UBE3D-203ENST00000369747 CCDC192P0DO97 292 aa19.93■□□□□ 0.78
UBE3D-203ENST00000369747 RCAN1P53805 252 aa19.93■□□□□ 0.78
UBE3D-203ENST00000369747 VGLL4Q14135 290 aa19.93■□□□□ 0.78
UBE3D-203ENST00000369747 CHADLQ6NUI6 762 aa19.93■□□□□ 0.78
UBE3D-203ENST00000369747 PAPPA2Q9BXP8 1791 aa19.93■□□□□ 0.78
UBE3D-203ENST00000369747 UBE2Q2LH0YL09 131 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 RAD21O60216 631 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 ITGBL1O95965 494 aaPredicted RBP19.92■□□□□ 0.78
UBE3D-203ENST00000369747 SSRP1Q08945 709 aaKnown RBP19.92■□□□□ 0.78
UBE3D-203ENST00000369747 RTN1Q16799 776 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 CCAR1Q8IX12 1150 aaKnown RBP19.92■□□□□ 0.78
UBE3D-203ENST00000369747 LINC00301Q8NCQ3 95 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 SLC26A6Q9BXS9 759 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 GOLPH3LQ9H4A5 285 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 POLR3EQ9NVU0 708 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 CLIC4Q9Y696 253 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 USP17L5A8MUK1 530 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 KIF3CO14782 793 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 GOLGA8HP0CJ92 632 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 CALM1P0DP23 149 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 CALM2P0DP24 149 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 CALM3P0DP25 149 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 PTPRAP18433 802 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 IREB2P48200 963 aaKnown RBP19.92■□□□□ 0.78
UBE3D-203ENST00000369747 MAP3K9P80192 1104 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 PPP4R3BQ5MIZ7 849 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 USP17L2Q6R6M4 530 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 STAG2Q8N3U4 1231 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 CCDC82Q8N4S0 544 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 PICK1Q9NRD5 415 aa19.92■□□□□ 0.78
UBE3D-203ENST00000369747 ESPNB1AK53 854 aa19.91■□□□□ 0.78
UBE3D-203ENST00000369747 PDHBP11177 359 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms