RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 REPS2Q8NFH8 660 aa24.39■■□□□ 1.49
SMNDC1-201ENST00000369592 SHISA4Q96DD7 197 aa24.39■■□□□ 1.49
SMNDC1-201ENST00000369592 NUDT12Q9BQG2 462 aa24.39■■□□□ 1.49
SMNDC1-201ENST00000369592 MOV10L1Q9BXT6 1211 aaKnown RBP24.39■■□□□ 1.49
SMNDC1-201ENST00000369592 IL25Q9H293 177 aa24.39■■□□□ 1.49
SMNDC1-201ENST00000369592 ZNF236Q9UL36 1845 aa24.39■■□□□ 1.49
SMNDC1-201ENST00000369592 TTLL1O95922 423 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 MYCP01106 439 aaPredicted RBP24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 IGHA2P01877 340 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 GJB1P08034 283 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 TSPY3P0CV98 308 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 TSPY8P0CW00 308 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 MFAP1P55081 439 aaKnown RBP24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 UBXN2AP68543 259 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 FAM83BQ5T0W9 1011 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 GMCL1P1Q8NEA9 526 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 SHCBP1Q8NEM2 672 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 SPATC1LQ9H0A9 340 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 UNC93B1Q9H1C4 597 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 PPP1R9AQ9ULJ8 1098 aa24.38■■□□□ 1.49
SMNDC1-201ENST00000369592 PTPREP23469 700 aa24.37■■□□□ 1.49
SMNDC1-201ENST00000369592 TRIB2Q92519 343 aa24.37■■□□□ 1.49
SMNDC1-201ENST00000369592 PAK6Q9NQU5 681 aaPredicted RBP24.37■■□□□ 1.49
SMNDC1-201ENST00000369592 DIAPH3Q9NSV4 1193 aa24.37■■□□□ 1.49
SMNDC1-201ENST00000369592 ZNFX1Q9P2E3 1918 aaKnown RBP24.37■■□□□ 1.49
SMNDC1-201ENST00000369592 SLC15A5A6NIM6 579 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 HMGCRP04035 888 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 HOXC6P09630 235 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 CYP2B6P20813 491 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 GJA8P48165 433 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 GRB14Q14449 540 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 TMEM132BQ14DG7 1078 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 MAP3K21Q5TCX8 1036 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 NKX2-3Q8TAU0 364 aa24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 NUP88Q99567 741 aaPredicted RBP24.36■■□□□ 1.49
SMNDC1-201ENST00000369592 VWA5AO00534 786 aa24.35■■□□□ 1.49
SMNDC1-201ENST00000369592 MAP2K5Q13163 448 aa24.35■■□□□ 1.49
SMNDC1-201ENST00000369592 DSCC1Q9BVC3 393 aa24.35■■□□□ 1.49
SMNDC1-201ENST00000369592 RNF208Q9H0X6 261 aa24.35■■□□□ 1.49
SMNDC1-201ENST00000369592 BIN2Q9UBW5 565 aaPredicted RBP24.35■■□□□ 1.49
SMNDC1-201ENST00000369592 RGS2P41220 211 aa24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 TRIM32Q13049 653 aa24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 UBE2Q1Q7Z7E8 422 aa24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 TBC1D10CQ8IV04 446 aa24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 LRRC47Q8N1G4 583 aaKnown RBP24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 STAG1Q8WVM7 1258 aa24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 TCP11L1Q9NUJ3 509 aa24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 ZNF214Q9UL59 606 aaPredicted RBP24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 COLQQ9Y215 455 aaPredicted RBP24.34■■□□□ 1.49
SMNDC1-201ENST00000369592 TSPY2A6NKD2 308 aa24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 NMT2O60551 498 aa24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 PCP11498 1178 aaKnown RBP24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 ERCC3P19447 782 aa24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 PPP4R3BQ5MIZ7 849 aa24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 AKNAD1Q5T1N1 836 aa24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 TRMT44Q8IYL2 757 aaKnown RBP24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 APBA2Q99767 749 aa24.33■■□□□ 1.49
SMNDC1-201ENST00000369592 STRNO43815 780 aa24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 CHMLP26374 656 aa24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 HAND2P61296 217 aa24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 CCL14Q16627 93 aa24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 CCAR1Q8IX12 1150 aaKnown RBP24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 SLF1Q9BQI6 1058 aa24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 CRISPLD2Q9H0B8 497 aa24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 MROH8Q9H579 483 aa24.32■■□□□ 1.48
SMNDC1-201ENST00000369592 RANBP6O60518 1105 aaKnown RBP24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 SGPL1O95470 568 aa24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 SLFN13Q68D06 897 aa24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 RIOX2Q8IUF8 465 aa24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 ABRAQ8N0Z2 381 aa24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 U2AF1L4Q8WU68 220 aaKnown RBP24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 GMCL1Q96IK5 515 aa24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 RPTORQ8N122 1335 aa24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 RAD50Q92878 1312 aa24.31■■□□□ 1.48
SMNDC1-201ENST00000369592 ATP2A1O14983 1001 aa24.3■■□□□ 1.48
SMNDC1-201ENST00000369592 PRPF38AQ8NAV1 312 aaKnown RBP24.3■■□□□ 1.48
SMNDC1-201ENST00000369592 NPLOC4Q8TAT6 608 aa24.3■■□□□ 1.48
SMNDC1-201ENST00000369592 FLRT1Q9NZU1 646 aa24.3■■□□□ 1.48
SMNDC1-201ENST00000369592 PLA2G6O60733 806 aa24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 SLC25A27O95847 323 aa24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 BMP3P12645 472 aa24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 CAPN2P17655 700 aa24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 RCSD1Q6JBY9 416 aa24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 FEM1BQ9UK73 627 aa24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 IVNS1ABPQ9Y6Y0 642 aa24.29■■□□□ 1.48
SMNDC1-201ENST00000369592 RAD21O60216 631 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 COBLO75128 1261 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 ZKSCAN1P17029 563 aaPredicted RBP24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 ADORA2AP29274 412 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 STAT3P40763 770 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 NT5C2P49902 561 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 CACNB2Q08289 660 aaPredicted RBP24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 MFSD6Q6ZSS7 791 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 CENPQQ7L2Z9 268 aaPredicted RBP24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 SLC38A10Q9HBR0 1119 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 STX8Q9UNK0 236 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 NEDD4P46934 1319 aa24.28■■□□□ 1.48
SMNDC1-201ENST00000369592 ZNF213O14771 459 aa24.27■■□□□ 1.48
SMNDC1-201ENST00000369592 WDR78Q5VTH9 848 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms