RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 COL4A2P08572 1712 aa8.02□□□□□ -1.13
CSDE1-204ENST00000369530 GOLGA6L22H0YM25 854 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 GSTO1P78417 241 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 VPS53Q5VIR6 699 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 CHD1LQ86WJ1 897 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 IQUBQ8NA54 791 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 STAG1Q8WVM7 1258 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 CRYGNQ8WXF5 182 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 TRIM47Q96LD4 638 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 PI4KBQ9UBF8 816 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 KIF26AQ9ULI4 1882 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-204ENST00000369530 GTF2A2P52657 109 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 SUPT20HL1Q3ZLR7 823 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 TTC22Q5TAA0 569 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 LSG1Q9H089 658 aaKnown RBP8.01□□□□□ -1.13
CSDE1-204ENST00000369530 ZNF214Q9UL59 606 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-204ENST00000369530 IQSEC3Q9UPP2 1182 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-204ENST00000369530 GPR25O00155 361 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 CLSTN1O94985 981 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 HUNKP57058 714 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 LACTBP83111 547 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-204ENST00000369530 FUT2Q10981 343 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 GRB14Q14449 540 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 C11orf91Q3C1V1 193 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 AACSQ86V21 672 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 MICAL3Q7RTP6 2002 aa8.01□□□□□ -1.13
CSDE1-204ENST00000369530 RNF113AO15541 343 aaKnown RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 EPB41L2O43491 1005 aaKnown RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 BACE1P56817 501 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 EAPPQ56P03 285 aaPredicted RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 LHX8Q68G74 356 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 OTOP1Q7RTM1 612 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 NBPF11Q86T75 865 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 SUGP1Q8IWZ8 645 aaKnown RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 BANK1Q8NDB2 785 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 ZKSCAN7Q9P0L1 754 aaPredicted RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 SCN5AQ14524 2016 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 RBM47A0AV96 593 aaKnown RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 PRR29P0C7W0 189 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 CYP2D6P10635 497 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 MX1P20591 662 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 HOXC8P31273 242 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 OS9Q13438 667 aaPredicted RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 C1orf53Q5VUE5 145 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 SULF1Q8IWU6 871 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 C2orf69Q8N8R5 385 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 ARHGAP39Q9C0H5 1083 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 GTF3C5Q9Y5Q8 519 aaPredicted RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 CCDC189A1A4V9 331 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 NECTIN1Q15223 517 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 STOX1Q6ZVD7 989 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 PXYLP1Q8TE99 480 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 GMCL1Q96IK5 515 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 SEC62Q99442 399 aaKnown RBP8□□□□□ -1.13
CSDE1-204ENST00000369530 KIF2CQ99661 725 aa8□□□□□ -1.13
CSDE1-204ENST00000369530 PATL2C9JE40 543 aaKnown RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 TPM3P06753 285 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 XRCC5P13010 732 aaKnown RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 HOXD8P13378 290 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 CASQ1P31415 396 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 GTF2A1P52655 376 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 G3BP1Q13283 466 aaKnown RBP eCLIP7.99□□□□□ -1.131e-6■■□□□ 12.6
CSDE1-204ENST00000369530 MAGEB6Q8N7X4 407 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 MNS1Q8NEH6 495 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 KIAA1524Q8TCG1 905 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 IL1RAPL2Q9NP60 686 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 FLRT1Q9NZU1 646 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 BTBD7Q9P203 1132 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 WDR19Q8NEZ3 1342 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 RIOK3O14730 519 aaKnown RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 HMMRO75330 724 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 LBX1P52954 281 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 PKN2Q16513 984 aaKnown RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 TRPV1Q8NER1 839 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 MCOLN1Q9GZU1 580 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 NYAP2Q9P242 653 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 SWAP70Q9UH65 585 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 TCP10L2B9ZVM9 353 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 EDNRBP24530 442 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 ANTXR2P58335 489 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 TRDNQ13061 729 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 MAPK8IP2Q13387 824 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 Q3C1V9 767 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 FAM184AQ8NB25 1140 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 MAP4K1Q92918 833 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 ZNF446Q9NWS9 450 aa7.99□□□□□ -1.13
CSDE1-204ENST00000369530 AATFQ9NY61 560 aaKnown RBP eCLIP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 FNDC1Q4ZHG4 1894 aaPredicted RBP7.99□□□□□ -1.13
CSDE1-204ENST00000369530 SPDYE16A6NNV3 312 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 HNRNPH2P55795 449 aaKnown RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 TBC1D10CQ8IV04 446 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 TSC1Q92574 1164 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 OTUD5Q96G74 571 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 DSCC1Q9BVC3 393 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 UBXN6Q9BZV1 441 aa7.98□□□□□ -1.13
CSDE1-204ENST00000369530 ALDH8A1Q9H2A2 487 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 RBM28Q9NW13 759 aaKnown RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 SETQ01105 290 aaPredicted RBP7.98□□□□□ -1.13
CSDE1-204ENST00000369530 FAM110CQ1W6H9 321 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms