RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 MTRQ99707 1265 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 ARHGAP6O43182 974 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 PPFIBP1Q86W92 1011 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 AMOTL1Q8IY63 956 aa13.05□□□□□ -0.32
RAB39B-201ENST00000369454 RPGRQ92834 1020 aaKnown RBP13.05□□□□□ -0.32
RAB39B-201ENST00000369454 FGRP09769 529 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
RAB39B-201ENST00000369454 TRIM65Q6PJ69 517 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 TMEM60Q9H2L4 133 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 TAB2Q9NYJ8 693 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 ZHX1Q9UKY1 873 aaPredicted RBP13.04□□□□□ -0.32
RAB39B-201ENST00000369454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.04□□□□□ -0.32
RAB39B-201ENST00000369454 TOM1O60784 492 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 STAT6P42226 847 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 PICALMQ13492 652 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 TRIML1Q8N9V2 468 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 UIMC1Q96RL1 719 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 TRIM49BA6NDI0 452 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 RIMBP2O15034 1052 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 ZSCAN12O43309 604 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 CYTH3O43739 400 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 CASP14P31944 242 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 BTDP43251 543 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 NR1I3Q14994 352 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 CLEC10AQ8IUN9 316 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
RAB39B-201ENST00000369454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.03□□□□□ -0.32
RAB39B-201ENST00000369454 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 N4BP3O15049 544 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 RAD21O60216 631 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 BAG3O95817 575 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 GPSM2P81274 684 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 SLC35G1Q2M3R5 365 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 AKR1B15C9JRZ8 316 aaPredicted RBP13.03□□□□□ -0.32
RAB39B-201ENST00000369454 LETM2Q2VYF4 491 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 SPATA20Q8TB22 786 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 TMEM47Q9BQJ4 181 aa13.03□□□□□ -0.32
RAB39B-201ENST00000369454 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
RAB39B-201ENST00000369454 PCP11498 1178 aaKnown RBP13.02□□□□□ -0.32
RAB39B-201ENST00000369454 ERCC5P28715 1186 aaPredicted RBP13.02□□□□□ -0.32
RAB39B-201ENST00000369454 GRAPQ13588 217 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 TEX11Q8IYF3 940 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.32
RAB39B-201ENST00000369454 MAD2L2Q9UI95 211 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 KLRF2D3W0D1 207 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 BMP15O95972 392 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 TBX2Q13207 712 aaPredicted RBP13.02□□□□□ -0.32
RAB39B-201ENST00000369454 ZNF804AQ7Z570 1209 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.32
RAB39B-201ENST00000369454 UBXN4Q92575 508 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 GSDMAQ96QA5 445 aa13.02□□□□□ -0.32
RAB39B-201ENST00000369454 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.32
RAB39B-201ENST00000369454 CASQ1P31415 396 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 TXLNAP40222 546 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 UBA7P41226 1012 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 NAPAP54920 295 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 VPS72Q15906 364 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 FILIP1LQ4L180 1135 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 SBK1Q52WX2 424 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 DTHD1Q6ZMT9 781 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 SH3RF1Q7Z6J0 888 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 NELFBQ8WX92 580 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 ST7Q9NRC1 585 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.33
RAB39B-201ENST00000369454 A0A1B0GTH6 734 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 SLURP2P0DP57 97 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 CCDC12Q8WUD4 166 aaPredicted RBP13.01□□□□□ -0.33
RAB39B-201ENST00000369454 EYA3Q99504 573 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 LRRC4BQ9NT99 713 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 FRMPD2Q68DX3 1309 aaPredicted RBP13.01□□□□□ -0.33
RAB39B-201ENST00000369454 CCP110O43303 1012 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 ERCC3P19447 782 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 CALML3P27482 149 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 FXR1P51114 621 aaKnown RBP eCLIP13.01□□□□□ -0.33
RAB39B-201ENST00000369454 ATP2B2Q01814 1243 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 E2F4Q16254 413 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 TEX35Q5T0J7 233 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 RAD9BQ6WBX8 426 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 NUP88Q99567 741 aaPredicted RBP13.01□□□□□ -0.33
RAB39B-201ENST00000369454 SRCAPQ6ZRS2 3230 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 STX10O60499 249 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 RPN1P04843 607 aaKnown RBP13.01□□□□□ -0.33
RAB39B-201ENST00000369454 RASA1P20936 1047 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 KRT31Q15323 416 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 JAKMIP3Q5VZ66 844 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 PDXDC2PQ6P474 469 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 APTXQ7Z2E3 356 aaKnown RBP13.01□□□□□ -0.33
RAB39B-201ENST00000369454 L2HGDHQ9H9P8 463 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 CD209Q9NNX6 404 aa13.01□□□□□ -0.33
RAB39B-201ENST00000369454 ADD3Q9UEY8 706 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms