RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CCT6AP40227 531 aaKnown RBP11.48□□□□□ -0.57
PRDM1-201ENST00000369089 ARPC4P59998 168 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 NAA35Q5VZE5 725 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 ZNF280DQ6N043 979 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 MPRIPQ6WCQ1 1025 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 REXO1L1PQ8IX06 675 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 MAML3Q96JK9 1138 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 CATSPER2Q96P56 530 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 SUCLA2Q9P2R7 463 aaPredicted RBP11.48□□□□□ -0.57
PRDM1-201ENST00000369089 RGS16O15492 202 aaPredicted RBP11.48□□□□□ -0.57
PRDM1-201ENST00000369089 DKC1O60832 514 aaKnown RBP eCLIP11.48□□□□□ -0.57
PRDM1-201ENST00000369089 ATP4AP20648 1035 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 KCNA3P22001 575 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 CDC37L1Q7L3B6 337 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 EXOC8Q8IYI6 725 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 INTS9Q9NV88 658 aaKnown RBP11.48□□□□□ -0.57
PRDM1-201ENST00000369089 PARP3Q9Y6F1 533 aa11.48□□□□□ -0.57
PRDM1-201ENST00000369089 ARHGAP10A1A4S6 786 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 P4HA2O15460 535 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 BAG2O95816 211 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 LSP1P33241 339 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 TMEM110Q86TL2 294 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 DDX23Q9BUQ8 820 aaKnown RBP11.47□□□□□ -0.57
PRDM1-201ENST00000369089 TSKSQ9UJT2 592 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 L1RE1Q9UN81 338 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 PPIP5K1Q6PFW1 1433 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 TBC1D8BQ0IIM8 1120 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 LONRF3Q496Y0 759 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 GET4Q7L5D6 327 aaPredicted RBP11.47□□□□□ -0.57
PRDM1-201ENST00000369089 NAF1Q96HR8 494 aaKnown RBP11.47□□□□□ -0.57
PRDM1-201ENST00000369089 HMG20BQ9P0W2 317 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 HPCAL4Q9UM19 191 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 C2CD2Q9Y426 696 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 PIK3C2GO75747 1445 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 MCF2LO15068 1137 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 RAB27AP51159 221 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 PDE1BQ01064 536 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 MECOMQ03112 1051 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.47□□□□□ -0.57
PRDM1-201ENST00000369089 NFE2L3Q9Y4A8 694 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 MARCH6O60337 910 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 FAM107AO95990 144 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 BASP1P80723 227 aaKnown RBP11.47□□□□□ -0.57
PRDM1-201ENST00000369089 RCN2Q14257 317 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 TSHZ3Q63HK5 1081 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 FANCLQ9NW38 375 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 ANGPTL2Q9UKU9 493 aa11.47□□□□□ -0.57
PRDM1-201ENST00000369089 ABCA8O94911 1581 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 B4DLN1 442 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 POTEJP0CG39 1038 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 EEF2P13639 858 aaKnown RBP11.46□□□□□ -0.57
PRDM1-201ENST00000369089 TCP1P17987 556 aaKnown RBP11.46□□□□□ -0.57
PRDM1-201ENST00000369089 MTIF2P46199 727 aaKnown RBP11.46□□□□□ -0.57
PRDM1-201ENST00000369089 MAP3K7CLP57077 242 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 VPS36Q86VN1 386 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 TRIM22Q8IYM9 498 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 DNAJC9Q8WXX5 260 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 SH3GL1Q99961 368 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 ATXN10Q9UBB4 475 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 WDR37Q9Y2I8 494 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 MAST1Q9Y2H9 1570 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 TMEM232C9JQI7 657 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 ATP6V1G2O95670 118 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 FESP07332 822 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 KRT9P35527 623 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 GUCY1A3Q02108 690 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 RCN1Q15293 331 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 OGFOD1Q8N543 542 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 ENAHQ8N8S7 591 aaPredicted RBP11.46□□□□□ -0.57
PRDM1-201ENST00000369089 WDR60Q8WVS4 1066 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 RBM41Q96IZ5 413 aaKnown RBP11.46□□□□□ -0.57
PRDM1-201ENST00000369089 TSPAN18Q96SJ8 248 aa11.46□□□□□ -0.57
PRDM1-201ENST00000369089 XAB2Q9HCS7 855 aaKnown RBP11.46□□□□□ -0.57
PRDM1-201ENST00000369089 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.58
PRDM1-201ENST00000369089 CDHR2Q9BYE9 1310 aa11.46□□□□□ -0.58
PRDM1-201ENST00000369089 H0Y3Z8 333 aa11.46□□□□□ -0.58
PRDM1-201ENST00000369089 MDH1P40925 334 aaKnown RBP11.46□□□□□ -0.58
PRDM1-201ENST00000369089 USP14P54578 494 aa11.46□□□□□ -0.58
PRDM1-201ENST00000369089 BZW1Q7L1Q6 419 aaKnown RBP11.46□□□□□ -0.58
PRDM1-201ENST00000369089 BHMTQ93088 406 aa11.46□□□□□ -0.58
PRDM1-201ENST00000369089 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.46□□□□□ -0.58
PRDM1-201ENST00000369089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.46□□□□□ -0.58
PRDM1-201ENST00000369089 SMAPO00193 183 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 LIN7AO14910 233 aaPredicted RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 KDM1AO60341 852 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 TRIM37O94972 964 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 NOP14P78316 857 aaKnown RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 KLC3Q6P597 504 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 SMCR8Q8TEV9 937 aaPredicted RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 PPP1R14BQ96C90 147 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 NRDE2Q9H7Z3 1164 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 GALNT8Q9NY28 637 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 R3HDM2Q9Y2K5 976 aaKnown RBP11.45□□□□□ -0.58
PRDM1-201ENST00000369089 A0A1W2PP64 1363 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 IKBKBO14920 756 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 UBXN1Q04323 297 aa11.45□□□□□ -0.58
PRDM1-201ENST00000369089 MLKLQ8NB16 471 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms