RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 ZNF483Q8TF39 744 aaPredicted RBP17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 STRBPQ96SI9 672 aaKnown RBP17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 MRFAP1Q9Y605 127 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 TSPY2A6NKD2 308 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 MYO1FO00160 1098 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 STX6O43752 255 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 BBOX1O75936 387 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 ALDH1B1P30837 517 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 ETF1P62495 437 aaKnown RBP17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 FAM196BA6NMK8 535 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 ERLIN1O75477 346 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 TBC1D10CQ8IV04 446 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 KLHL23Q8NBE8 558 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 CRNKL1Q9BZJ0 848 aaKnown RBP17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 UBXN6Q9BZV1 441 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
SEMA6C-202ENST00000368912 PHKBQ93100 1093 aa17.33■□□□□ 0.37
SEMA6C-202ENST00000368912 SPDL1Q96EA4 605 aa17.33■□□□□ 0.37
SEMA6C-202ENST00000368912 VAT1LQ9HCJ6 419 aa17.33■□□□□ 0.36
SEMA6C-202ENST00000368912 PICK1Q9NRD5 415 aa17.33■□□□□ 0.36
SEMA6C-202ENST00000368912 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.36
SEMA6C-202ENST00000368912 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
SEMA6C-202ENST00000368912 SNUPNO95149 360 aaKnown RBP17.33■□□□□ 0.36
SEMA6C-202ENST00000368912 EZRP15311 586 aaKnown RBP17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 NPR1P16066 1061 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 MASTLQ96GX5 879 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 SCLT1Q96NL6 688 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 ZSWIM6Q9HCJ5 1215 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 SRGNP10124 158 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 CCZ1BP86790 482 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 CCZ1P86791 482 aaPredicted RBP17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 E2F5Q15329 346 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 INTS4Q96HW7 963 aaKnown RBP17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 BAG1Q99933 345 aaPredicted RBP17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 ARFGEF2Q9Y6D5 1785 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 ADD1P35611 737 aaKnown RBP17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 CEP85LQ5SZL2 805 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 KCNB2Q92953 911 aa17.32■□□□□ 0.36
SEMA6C-202ENST00000368912 DPEP1P16444 411 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 ATP2B4P23634 1241 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 MFSD4BQ5TF39 518 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 AFAP1L1Q8TED9 768 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 SH3RF3Q8TEJ3 882 aaPredicted RBP17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 MCM8Q9UJA3 840 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 SIPA1L3O60292 1781 aaPredicted RBP17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 NMT2O60551 498 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 BTDP43251 543 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 ZKSCAN4Q969J2 545 aaPredicted RBP17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 CLRN2A0PK11 232 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 F13A1P00488 732 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 SETSIPP0DME0 302 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 SYT1P21579 422 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 ANKRD1Q15327 319 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 UBE3CQ15386 1083 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 RNF187Q5TA31 235 aaPredicted RBP17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 CCDC181Q5TID7 509 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 TMC6Q7Z403 805 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 MICAL1Q8TDZ2 1067 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 DSCC1Q9BVC3 393 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 NAT10Q9H0A0 1025 aaKnown RBP17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 SLC12A7Q9Y666 1083 aa17.31■□□□□ 0.36
SEMA6C-202ENST00000368912 BAG3O95817 575 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 GSDMDP57764 484 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 KIAA1328Q86T90 577 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 TDRD7Q8NHU6 1098 aaKnown RBP17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 CRACR2AQ9BSW2 395 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 LEMD3Q9Y2U8 911 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 PCDHAC2Q9Y5I4 1007 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 RPS6KA5O75582 802 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 RANBP1P43487 201 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 GNG11P61952 73 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 AKAP17AQ02040 695 aaKnown RBP17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 SPTY2D1Q68D10 685 aaPredicted RBP17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 GOLGA1Q92805 767 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 TATDN2Q93075 761 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 CAMKK2Q96RR4 588 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 MYO6Q9UM54 1294 aa17.3■□□□□ 0.36
SEMA6C-202ENST00000368912 GOLGA8AA7E2F4 631 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 CCDC93Q567U6 631 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 SAAL1Q96ER3 474 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 SAMM50Q9Y512 469 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 E4F1Q66K89 784 aaPredicted RBP17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 TMEM87AQ8NBN3 555 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 TAF1P21675 1872 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 GSG1L2A8MUP6 293 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 KIF4AO95239 1232 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 CRACR2BQ8N4Y2 399 aaPredicted RBP17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 SLC26A6Q9BXS9 759 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 SHANK3Q9BYB0 1731 aa17.29■□□□□ 0.36
SEMA6C-202ENST00000368912 PPARAQ07869 468 aa17.28■□□□□ 0.36
SEMA6C-202ENST00000368912 ZNF444Q8N0Y2 327 aaPredicted RBP17.28■□□□□ 0.36
SEMA6C-202ENST00000368912 CLIC6Q96NY7 704 aa17.28■□□□□ 0.36
SEMA6C-202ENST00000368912 SUGCTQ9HAC7 445 aa17.28■□□□□ 0.36
SEMA6C-202ENST00000368912 RPS6KA3P51812 740 aa17.28■□□□□ 0.36
SEMA6C-202ENST00000368912 CUL4AQ13619 759 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms