RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 ZNF543Q08ER8 600 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 SLC35G1Q2M3R5 365 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 KLHL40Q2TBA0 621 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 SIAH1Q8IUQ4 282 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 UBA5Q9GZZ9 404 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 ADARB2Q9NS39 739 aaKnown RBP22.42■■□□□ 1.18
CHTOP-204ENST00000368694 BTBD18B2RXH4 712 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 CAP2P40123 477 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 MAP3K10Q02779 954 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 MYSM1Q5VVJ2 828 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 ATL3Q6DD88 541 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 HOMER1Q86YM7 354 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 FTOQ9C0B1 505 aaKnown RBP eCLIP22.42■■□□□ 1.18
CHTOP-204ENST00000368694 ARHGEF10LQ9HCE6 1279 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 VAT1LQ9HCJ6 419 aa22.42■■□□□ 1.18
CHTOP-204ENST00000368694 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
CHTOP-204ENST00000368694 U2AF2P26368 475 aaKnown RBP eCLIP22.41■■□□□ 1.183e-7■■■■□ 22.1
CHTOP-204ENST00000368694 GPATCH4Q5T3I0 446 aaKnown RBP22.41■■□□□ 1.18
CHTOP-204ENST00000368694 SLFN13Q68D06 897 aa22.41■■□□□ 1.18
CHTOP-204ENST00000368694 KCTD1Q719H9 257 aa22.41■■□□□ 1.18
CHTOP-204ENST00000368694 GPT2Q8TD30 523 aa22.41■■□□□ 1.18
CHTOP-204ENST00000368694 GPKOWQ92917 476 aaPredicted RBP eCLIP22.41■■□□□ 1.18
CHTOP-204ENST00000368694 SHISA4Q96DD7 197 aa22.41■■□□□ 1.18
CHTOP-204ENST00000368694 RRP36Q96EU6 259 aaKnown RBP22.41■■□□□ 1.18
CHTOP-204ENST00000368694 USP28Q96RU2 1077 aa22.41■■□□□ 1.18
CHTOP-204ENST00000368694 PHF20Q9BVI0 1012 aa22.41■■□□□ 1.18
CHTOP-204ENST00000368694 GZF1Q9H116 711 aaPredicted RBP22.41■■□□□ 1.18
CHTOP-204ENST00000368694 SEC63Q9UGP8 760 aaKnown RBP22.41■■□□□ 1.18
CHTOP-204ENST00000368694 POLR2AP24928 1970 aaKnown RBP22.41■■□□□ 1.18
CHTOP-204ENST00000368694 VEGFAP15692 232 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-204ENST00000368694 SMARCA1P28370 1054 aa22.4■■□□□ 1.18
CHTOP-204ENST00000368694 SLC1A4P43007 532 aa22.4■■□□□ 1.18
CHTOP-204ENST00000368694 NBPF12Q5TAG4 269 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-204ENST00000368694 LEO1Q8WVC0 666 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-204ENST00000368694 BRMS1Q9HCU9 246 aa22.4■■□□□ 1.18
CHTOP-204ENST00000368694 MBD3O95983 291 aa22.4■■□□□ 1.18
CHTOP-204ENST00000368694 HEATR3Q7Z4Q2 680 aa22.4■■□□□ 1.18
CHTOP-204ENST00000368694 NOSTRINQ8IVI9 506 aa22.4■■□□□ 1.18
CHTOP-204ENST00000368694 DCAF4Q8WV16 495 aa22.4■■□□□ 1.18
CHTOP-204ENST00000368694 FOXP1Q9H334 677 aaPredicted RBP22.4■■□□□ 1.18
CHTOP-204ENST00000368694 ELP1O95163 1332 aa22.39■■□□□ 1.18
CHTOP-204ENST00000368694 PRKCSHP14314 528 aaPredicted RBP22.39■■□□□ 1.17
CHTOP-204ENST00000368694 KRT2P35908 639 aa22.39■■□□□ 1.17
CHTOP-204ENST00000368694 NLRP5P59047 1200 aa22.39■■□□□ 1.17
CHTOP-204ENST00000368694 UBE2HP62256 183 aa22.39■■□□□ 1.17
CHTOP-204ENST00000368694 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.39■■□□□ 1.17
CHTOP-204ENST00000368694 F5H6K3 240 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 ASNSP08243 561 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 KLRC3Q07444 240 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 NR5A1Q13285 461 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 PRAMEF18Q5VWM3 479 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 GMCL1P1Q8NEA9 526 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 A0A1W2PRG0 241 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 PHF20L1A8MW92 1017 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 DCAF15Q66K64 600 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 TTBK2Q6IQ55 1244 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 OXER1Q8TDS5 423 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 HOOK2Q96ED9 719 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 PIGSQ96S52 555 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 RIOX1Q9H6W3 641 aa22.38■■□□□ 1.17
CHTOP-204ENST00000368694 ECE1P42892 770 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 WWC2Q6AWC2 1192 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 SH3GLB2Q9NR46 395 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 GOLGA6L4A6NEF3 574 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 NDUFB10O96000 172 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 SLC16A2P36021 539 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 ACER1Q8TDN7 264 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 PPP2R3BQ9Y5P8 575 aa22.37■■□□□ 1.17
CHTOP-204ENST00000368694 CAVIN1Q6NZI2 390 aaKnown RBP22.36■■□□□ 1.17
CHTOP-204ENST00000368694 ADGRF4Q8IZF3 695 aa22.36■■□□□ 1.17
CHTOP-204ENST00000368694 CCDC148Q8NFR7 591 aa22.36■■□□□ 1.17
CHTOP-204ENST00000368694 BARHL2Q9NY43 387 aa22.36■■□□□ 1.17
CHTOP-204ENST00000368694 SYNPO2Q9UMS6 1093 aa22.36■■□□□ 1.17
CHTOP-204ENST00000368694 CLIC4Q9Y696 253 aa22.36■■□□□ 1.17
CHTOP-204ENST00000368694 PITPNM2Q9BZ72 1349 aa22.36■■□□□ 1.17
CHTOP-204ENST00000368694 CALML3P27482 149 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 SPICE1Q8N0Z3 855 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 GMCL1Q96IK5 515 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 GOPCQ9HD26 462 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 RTEL1Q9NZ71 1219 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 ZC3H4Q9UPT8 1303 aaKnown RBP22.35■■□□□ 1.17
CHTOP-204ENST00000368694 STXBP3O00186 592 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 NUP88Q99567 741 aaPredicted RBP22.35■■□□□ 1.17
CHTOP-204ENST00000368694 ZNF341Q9BYN7 854 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 SH2D4AQ9H788 454 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 POLR3EQ9NVU0 708 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 TMX2Q9Y320 296 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 DOCK1Q14185 1865 aa22.35■■□□□ 1.17
CHTOP-204ENST00000368694 CTNND1O60716 968 aaKnown RBP22.34■■□□□ 1.17
CHTOP-204ENST00000368694 NAPAP54920 295 aa22.34■■□□□ 1.17
CHTOP-204ENST00000368694 IKQ13123 557 aaPredicted RBP22.34■■□□□ 1.17
CHTOP-204ENST00000368694 STK38Q15208 465 aa22.34■■□□□ 1.17
CHTOP-204ENST00000368694 ZYXQ15942 572 aaKnown RBP22.34■■□□□ 1.17
CHTOP-204ENST00000368694 CCDC84Q86UT8 332 aaPredicted RBP22.34■■□□□ 1.17
CHTOP-204ENST00000368694 DCPSQ96C86 337 aaKnown RBP22.34■■□□□ 1.17
CHTOP-204ENST00000368694 L3MBTL3Q96JM7 780 aaPredicted RBP22.34■■□□□ 1.17
CHTOP-204ENST00000368694 JMJD4Q9H9V9 463 aa22.34■■□□□ 1.17
CHTOP-204ENST00000368694 RCOR1Q9UKL0 485 aa22.34■■□□□ 1.17
CHTOP-204ENST00000368694 BMP3P12645 472 aa22.34■■□□□ 1.17
CHTOP-204ENST00000368694 NPY5RQ15761 445 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms