RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 USP17L22D6RA61 530 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 USP17L17D6RBQ6 530 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 USP17L19D6RCP7 530 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 USP17L20D6RJB6 530 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
EFNA1-201ENST00000368406 VCAM1P19320 739 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 IRX3P78415 501 aaPredicted RBP14.83□□□□□ -0.04
EFNA1-201ENST00000368406 LACTBP83111 547 aaPredicted RBP14.83□□□□□ -0.04
EFNA1-201ENST00000368406 USP17L24Q0WX57 530 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 Q6ZUG5 572 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 NKX2-3Q8TAU0 364 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 ZSWIM6Q9HCJ5 1215 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 SYNPO2Q9UMS6 1093 aa14.83□□□□□ -0.04
EFNA1-201ENST00000368406 HTTP42858 3142 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 SH2B2O14492 632 aaPredicted RBP14.82□□□□□ -0.04
EFNA1-201ENST00000368406 GNRH1P01148 92 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 NEK4P51957 841 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 KIF22Q14807 665 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 RABEP1Q15276 862 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 SYNE3Q6ZMZ3 975 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 CATSPERGQ6ZRH7 1159 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 DGKHQ86XP1 1220 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 CD99L2Q8TCZ2 262 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 GTF3C2Q8WUA4 911 aaPredicted RBP14.82□□□□□ -0.04
EFNA1-201ENST00000368406 MKL1Q969V6 931 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 CHMP4CQ96CF2 233 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 TTC14Q96N46 770 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 VCPKMTQ9H867 229 aa14.82□□□□□ -0.04
EFNA1-201ENST00000368406 FAM110CQ1W6H9 321 aa14.81□□□□□ -0.04
EFNA1-201ENST00000368406 CATIPQ7Z7H3 387 aa14.81□□□□□ -0.04
EFNA1-201ENST00000368406 PNMA1Q8ND90 353 aa14.81□□□□□ -0.04
EFNA1-201ENST00000368406 P2RX7Q99572 595 aaKnown RBP14.81□□□□□ -0.04
EFNA1-201ENST00000368406 TMEM47Q9BQJ4 181 aa14.81□□□□□ -0.04
EFNA1-201ENST00000368406 MTA3Q9BTC8 594 aa14.81□□□□□ -0.04
EFNA1-201ENST00000368406 MCOLN1Q9GZU1 580 aa14.81□□□□□ -0.04
EFNA1-201ENST00000368406 EFCC1Q9HA90 598 aa14.81□□□□□ -0.04
EFNA1-201ENST00000368406 CENPFP49454 3210 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 ST18O60284 1047 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 HERVK_113P62684 666 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 EXOSC10Q01780 885 aaKnown RBP14.8□□□□□ -0.04
EFNA1-201ENST00000368406 COL9A3Q14050 684 aaPredicted RBP14.8□□□□□ -0.04
EFNA1-201ENST00000368406 CCDC96Q2M329 555 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 NOL8Q76FK4 1167 aaKnown RBP14.8□□□□□ -0.04
EFNA1-201ENST00000368406 OTOP1Q7RTM1 612 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 SPICE1Q8N0Z3 855 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 TMTC2Q8N394 836 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 BRF1Q92994 677 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 LY9Q9HBG7 655 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 TRIM17Q9Y577 477 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 SLC12A7Q9Y666 1083 aa14.8□□□□□ -0.04
EFNA1-201ENST00000368406 NOVP48745 357 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 CAP1Q01518 475 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 IKQ13123 557 aaPredicted RBP14.79□□□□□ -0.04
EFNA1-201ENST00000368406 ANKRD1Q15327 319 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 SEC23AQ15436 765 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 KIAA1755Q5JYT7 1200 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 LBX2Q6XYB7 198 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 ANKRD13CQ8N6S4 541 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 IGDCC4Q8TDY8 1250 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 NUP133Q8WUM0 1156 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 RPAP3Q9H6T3 665 aaPredicted RBP14.79□□□□□ -0.04
EFNA1-201ENST00000368406 GPHNQ9NQX3 736 aaPredicted RBP14.79□□□□□ -0.04
EFNA1-201ENST00000368406 HOXC10Q9NYD6 342 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 MORF4L1Q9UBU8 362 aa14.79□□□□□ -0.04
EFNA1-201ENST00000368406 KLF18A0A0U1RQI7 1052 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 GOLGA8BA8MQT2 603 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 WDR46O15213 610 aaKnown RBP14.78□□□□□ -0.04
EFNA1-201ENST00000368406 LIFRP42702 1097 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 PSMC4P43686 418 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 PRMT2P55345 433 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 COG2Q14746 738 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 SLFN13Q68D06 897 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 RCSD1Q6JBY9 416 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 FBXO46Q6PJ61 603 aaPredicted RBP14.78□□□□□ -0.04
EFNA1-201ENST00000368406 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
EFNA1-201ENST00000368406 ZNF654Q8IZM8 581 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 IL17RAQ96F46 866 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 TANGO6Q9C0B7 1094 aa14.78□□□□□ -0.04
EFNA1-201ENST00000368406 F5H6K3 240 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 NDUFB10O96000 172 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 HOXD10P28358 340 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 SLC1A4P43007 532 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 AK2P54819 239 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 FCGRTP55899 365 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 KLRC3Q07444 240 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 APOBRQ0VD83 1088 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 MICU3Q86XE3 530 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 GMCL1P1Q8NEA9 526 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 GPRC5AQ8NFJ5 357 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 ANKS1AQ92625 1134 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 TRIM47Q96LD4 638 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 KIF2CQ99661 725 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 MYL10Q9BUA6 226 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 ARHGAP39Q9C0H5 1083 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 SENP2Q9HC62 589 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 PTPN22Q9Y2R2 807 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 RABGAP1Q9Y3P9 1069 aa14.77□□□□□ -0.04
EFNA1-201ENST00000368406 MYPNQ86TC9 1320 aa14.77□□□□□ -0.05
EFNA1-201ENST00000368406 ZBTB43O43298 467 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms