RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 SNHG28P0DPA3 235 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 KLRC3Q07444 240 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 ZNF543Q08ER8 600 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 FUT2Q10981 343 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 TTLL12Q14166 644 aaPredicted RBP18.42■□□□□ 0.54
LMNA-203ENST00000368297 GMCL1P1Q8NEA9 526 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 C8orf76Q96K31 380 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 FEZ1Q99689 392 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 GOPCQ9HD26 462 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 SYNPO2Q9UMS6 1093 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 TMX2Q9Y320 296 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 ZDHHC9Q9Y397 364 aa18.42■□□□□ 0.54
LMNA-203ENST00000368297 V9GY48 417 aaPredicted RBP18.42■□□□□ 0.54
LMNA-203ENST00000368297 PRPF3O43395 683 aaKnown RBP18.41■□□□□ 0.54
LMNA-203ENST00000368297 TRAK2O60296 914 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 NDUFB10O96000 172 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 ZSCAN22P10073 491 aaPredicted RBP18.41■□□□□ 0.54
LMNA-203ENST00000368297 SLC1A4P43007 532 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 ZYXQ15942 572 aaKnown RBP18.41■□□□□ 0.54
LMNA-203ENST00000368297 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.41■□□□□ 0.54
LMNA-203ENST00000368297 MTMR6Q9Y217 621 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 hCG_1642624A0A1W2PR95 340 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 IREB2P48200 963 aaKnown RBP18.41■□□□□ 0.54
LMNA-203ENST00000368297 GUCY1B3Q02153 619 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 TRIM29Q14134 588 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
LMNA-203ENST00000368297 KCTD1Q719H9 257 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 LDHDQ86WU2 507 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.41■□□□□ 0.54
LMNA-203ENST00000368297 AIFM3Q96NN9 605 aa18.41■□□□□ 0.54
LMNA-203ENST00000368297 UBE2Q2LH0YL09 131 aa18.4■□□□□ 0.54
LMNA-203ENST00000368297 MAP3K9P80192 1104 aa18.4■□□□□ 0.54
LMNA-203ENST00000368297 GSE1Q14687 1217 aa18.4■□□□□ 0.54
LMNA-203ENST00000368297 NOL9Q5SY16 702 aaKnown RBP18.4■□□□□ 0.54
LMNA-203ENST00000368297 UBA5Q9GZZ9 404 aa18.4■□□□□ 0.54
LMNA-203ENST00000368297 CPVLQ9H3G5 476 aa18.4■□□□□ 0.54
LMNA-203ENST00000368297 AS3MTQ9HBK9 375 aa18.4■□□□□ 0.54
LMNA-203ENST00000368297 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
LMNA-203ENST00000368297 SPICE1Q8N0Z3 855 aa18.39■□□□□ 0.53
LMNA-203ENST00000368297 GMCL1Q96IK5 515 aa18.39■□□□□ 0.53
LMNA-203ENST00000368297 NUP88Q99567 741 aaPredicted RBP18.39■□□□□ 0.53
LMNA-203ENST00000368297 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
LMNA-203ENST00000368297 VCPKMTQ9H867 229 aa18.39■□□□□ 0.53
LMNA-203ENST00000368297 VAT1LQ9HCJ6 419 aa18.39■□□□□ 0.53
LMNA-203ENST00000368297 ATP6V1DQ9Y5K8 247 aa18.39■□□□□ 0.53
LMNA-203ENST00000368297 CSADQ9Y600 493 aa18.39■□□□□ 0.53
LMNA-203ENST00000368297 BMP3P12645 472 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 PTPRAP18433 802 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 SMARCA1P28370 1054 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 MCTP1Q6DN14 999 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 OTUD7BQ6GQQ9 843 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 TTBK2Q6IQ55 1244 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 ZNF408Q9H9D4 720 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 OTOFQ9HC10 1997 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 TRAF5O00463 557 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 F13A1P00488 732 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 XBP1P17861 261 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
LMNA-203ENST00000368297 VGLL4Q14135 290 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 ARMC9Q7Z3E5 817 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 FERMT3Q86UX7 667 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 RRP36Q96EU6 259 aaKnown RBP18.38■□□□□ 0.53
LMNA-203ENST00000368297 GJB4Q9NTQ9 266 aa18.38■□□□□ 0.53
LMNA-203ENST00000368297 CYTH3O43739 400 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 SCG2P13521 617 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 SLC16A2P36021 539 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 PKN1Q16512 942 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 SLC35G1Q2M3R5 365 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 KRT40Q6A162 431 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.37■□□□□ 0.53
LMNA-203ENST00000368297 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 WDR18Q9BV38 432 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
LMNA-203ENST00000368297 ZHX2Q9Y6X8 837 aa18.37■□□□□ 0.53
LMNA-203ENST00000368297 PAPPA2Q9BXP8 1791 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 USP17L10C9JJH3 530 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 TMEM232C9JQI7 657 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 SPP2Q13103 211 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 PFKFB3Q16875 520 aaPredicted RBP18.36■□□□□ 0.53
LMNA-203ENST00000368297 KIAA1755Q5JYT7 1200 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 MOB2Q70IA6 237 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 ZNF280CQ8ND82 737 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 RIOX1Q9H6W3 641 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 SNCAIPQ9Y6H5 919 aa18.36■□□□□ 0.53
LMNA-203ENST00000368297 BAZ2BQ9UIF8 2168 aaKnown RBP18.35■□□□□ 0.53
LMNA-203ENST00000368297 USP14P54578 494 aa18.35■□□□□ 0.53
LMNA-203ENST00000368297 MTMR2Q13614 643 aa18.35■□□□□ 0.53
LMNA-203ENST00000368297 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
LMNA-203ENST00000368297 ANKRD13AQ8IZ07 590 aa18.35■□□□□ 0.53
LMNA-203ENST00000368297 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
LMNA-203ENST00000368297 PIGSQ96S52 555 aa18.35■□□□□ 0.53
LMNA-203ENST00000368297 PHIPQ8WWQ0 1821 aa18.35■□□□□ 0.53
LMNA-203ENST00000368297 TRIM75PA6NK02 468 aa18.34■□□□□ 0.53
LMNA-203ENST00000368297 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.531e-8■■■□□ 17.3
LMNA-203ENST00000368297 FOXD4L6Q3SYB3 417 aaPredicted RBP18.34■□□□□ 0.53
LMNA-203ENST00000368297 FOXD4L3Q6VB84 417 aaPredicted RBP18.34■□□□□ 0.53
LMNA-203ENST00000368297 ELP3Q9H9T3 547 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms