RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ZNF211Q13398 564 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 KIF4BQ2VIQ3 1234 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 LDLRAD1Q5T700 205 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 ANGEL2Q5VTE6 544 aaKnown RBP8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 ARHGAP39Q9C0H5 1083 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 C11orf16Q9NQ32 467 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 DDX19BQ9UMR2 479 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 NIP7Q9Y221 180 aaKnown RBP eCLIP8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 ATP6V0A2Q9Y487 856 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 KIF16BQ96L93 1317 aa8.02□□□□□ -1.13
ECHDC1-202ENST00000368289 ZSWIM8A7E2V4 1837 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 SOWAHDA6NJG2 315 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 H3BRB1 525 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 BCAR3O75815 825 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 RPLP1P05386 114 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 U2AF1L5P0DN76 240 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 VSIG8P0DPA2 414 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 PCSK2P16519 638 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 GJA8P48165 433 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 U2AF1Q01081 240 aaKnown RBP eCLIP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 SP3Q02447 781 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 TNP2Q05952 138 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 HDAC1Q13547 482 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 UBAP2LQ14157 1087 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 MVPQ14764 893 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 C1orf141Q5JVX7 400 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 FAM109BQ6ICB4 259 aaPredicted RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 ALYREFQ86V81 257 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 USP38Q8NB14 1042 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 CRAMP1Q96RY5 1269 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 TUT1Q9H6E5 874 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 ANO2Q9NQ90 1003 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 MARK1Q9P0L2 795 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 DMGDHQ9UI17 866 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 NSFL1CQ9UNZ2 370 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 IRS2Q9Y4H2 1338 aa8.01□□□□□ -1.13
ECHDC1-202ENST00000368289 MYO15AQ9UKN7 3530 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 COL3A1P02461 1466 aaPredicted RBP8□□□□□ -1.13
ECHDC1-202ENST00000368289 HEG1Q9ULI3 1381 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 KCNQ3O43525 872 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 BNIP3LO60238 219 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 DIAPH1O60610 1272 aaKnown RBP8□□□□□ -1.13
ECHDC1-202ENST00000368289 THBS1P07996 1170 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 MAPTP10636 758 aaKnown RBP8□□□□□ -1.13
ECHDC1-202ENST00000368289 MPSTP25325 297 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 CTGFP29279 349 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 ZAP70P43403 619 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 TYRO3Q06418 890 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 NBPF11Q86T75 865 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 ETFBKMTQ8IXQ9 262 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 DZIP1LQ8IYY4 767 aaKnown RBP8□□□□□ -1.13
ECHDC1-202ENST00000368289 TTC16Q8NEE8 873 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 MAFAQ8NHW3 353 aaPredicted RBP8□□□□□ -1.13
ECHDC1-202ENST00000368289 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 ARHGAP45Q92619 1136 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 PLEKHF1Q96S99 279 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 CDX2Q99626 313 aaPredicted RBP8□□□□□ -1.13
ECHDC1-202ENST00000368289 HTATIP2Q9BUP3 242 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 NDFIP2Q9NV92 336 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 BAHCC1Q9P281 2608 aa8□□□□□ -1.13
ECHDC1-202ENST00000368289 COL2A1P02458 1487 aaPredicted RBP8□□□□□ -1.13
ECHDC1-202ENST00000368289 DCDC2BA2VCK2 349 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 EFSO43281 561 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 TRIOO75962 3097 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 FGFR3P22607 806 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 TMPOP42166 694 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 EIF1AXP47813 144 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 ZNF280AP59817 542 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 LMOD3Q0VAK6 560 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 NFX1Q12986 1120 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 MTMR3Q13615 1198 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 TDHQ8IZJ6 230 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 ABHD17AQ96GS6 310 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 CLMNQ96JQ2 1002 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 DBNDD1Q9H9R9 158 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 BIN2Q9UBW5 565 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 ZMYND8Q9ULU4 1186 aaPredicted RBP7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 FNDC3AQ9Y2H6 1198 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 USP16Q9Y5T5 823 aa7.99□□□□□ -1.13
ECHDC1-202ENST00000368289 WFS1O76024 890 aa7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 GJB1P08034 283 aa7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 INPP5BP32019 993 aa7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 MAGEA10P43363 369 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 TNNT2P45379 298 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 FTSJ3Q8IY81 847 aaKnown RBP7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 SCN9AQ15858 1988 aa7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 CACNA1BQ00975 2339 aa7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 ZNF646O15015 1829 aaPredicted RBP7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 UBN2Q6ZU65 1347 aa7.98□□□□□ -1.13
ECHDC1-202ENST00000368289 MANSC4A6NHS7 340 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 FARP2O94887 1054 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 IGHDP01880 384 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 VIL1P09327 827 aaKnown RBP7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 MX2P20592 715 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 USP5P45974 858 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 PRKG1Q13976 671 aa7.97□□□□□ -1.13
ECHDC1-202ENST00000368289 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms