RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 DSC3Q14574 896 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 CLEC16AQ2KHT3 1053 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 SV2BQ7L1I2 683 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 CYB5D2Q8WUJ1 264 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 RNF141Q8WVD5 230 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 ASB16Q96NS5 453 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 ZMYM5Q9UJ78 669 aa6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 CNOT11Q9UKZ1 510 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-201ENST00000368287 GIPC1O14908 333 aa6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 NRDCO43847 1150 aa6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 RPL10P27635 214 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 KCNC1P48547 511 aa6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 DNAJC14Q6Y2X3 702 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 CEP128Q6ZU80 1094 aa6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 TP53I13Q8NBR0 393 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 FBF1Q8TES7 1133 aa6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 SRRDQ9UH36 339 aa6.04□□□□□ -1.44
ECHDC1-201ENST00000368287 RBM47A0AV96 593 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-201ENST00000368287 KIR2DL1P43626 348 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-201ENST00000368287 KIR2DL2P43627 348 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-201ENST00000368287 IGDCC3Q8IVU1 814 aa6.03□□□□□ -1.44
ECHDC1-201ENST00000368287 ACSF2Q96CM8 615 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-201ENST00000368287 ADAM30Q9UKF2 790 aa6.03□□□□□ -1.44
ECHDC1-201ENST00000368287 TTF2Q9UNY4 1162 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-201ENST00000368287 SHISA3A0PJX4 238 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 TREHO43280 583 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 USP17L7P0C7H9 530 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 PNLIPP16233 465 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 TNFRSF1AP19438 455 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 ERCC3P19447 782 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 UBXN11Q5T124 520 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 TMC6Q7Z403 805 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 WAPLQ7Z5K2 1190 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 LDHDQ86WU2 507 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 ZNF428Q96B54 188 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 MAP6Q96JE9 813 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 ZNF281Q9Y2X9 895 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 PCDHB5Q9Y5E4 795 aa6.02□□□□□ -1.45
ECHDC1-201ENST00000368287 ANKRD33BA6NCL7 494 aa6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 OVOL3O00110 214 aa6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 RPS26P62854 115 aaKnown RBP6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 ZFYVE27Q5T4F4 411 aa6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 RNF111Q6ZNA4 994 aa6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 FAM13CQ8NE31 585 aa6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 VWCEQ96DN2 955 aa6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 FAM8A1Q9UBU6 413 aa6.01□□□□□ -1.45
ECHDC1-201ENST00000368287 GRIN3BO60391 1043 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 MPOP05164 745 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 MAGEA10P43363 369 aaPredicted RBP6□□□□□ -1.45
ECHDC1-201ENST00000368287 MAPK8P45983 427 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 TNNI2P48788 182 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 SLURP1P55000 103 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 ERVFRD-1P60508 538 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 ATP2B2Q01814 1243 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 C12orf49Q9H741 205 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 USP40Q9NVE5 1235 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 SPG7Q9UQ90 795 aa6□□□□□ -1.45
ECHDC1-201ENST00000368287 FFAR3O14843 346 aa5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 BUB1BO60566 1050 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 YARSP54577 528 aaKnown RBP5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 TMEM62Q0P6H9 643 aa5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 SLC16A11Q8NCK7 471 aa5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 ASPNQ9BXN1 380 aa5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 ASCC2Q9H1I8 757 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 KLHL14Q9P2G3 628 aa5.99□□□□□ -1.45
ECHDC1-201ENST00000368287 SSU72P8A0A1W2PR75 194 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 UPK3BL1B0FP48 263 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 UPK3BL2E5RIL1 263 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 MATN3O15232 486 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 FSHBP01225 129 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 ARL4AP40617 200 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 NCKAP1LP55160 1127 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 RAB3GAP1Q15042 981 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 EAPPQ56P03 285 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 ALG1LQ6GMV1 187 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 NLGN1Q8N2Q7 840 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 HHIPL1Q96JK4 782 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 KREMEN1Q96MU8 473 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 PLCD4Q9BRC7 762 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 MIR1-1HGQ9H1L0 117 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 PCDHA5Q9Y5H7 936 aa5.98□□□□□ -1.45
ECHDC1-201ENST00000368287 ADAM17P78536 824 aa5.97□□□□□ -1.45
ECHDC1-201ENST00000368287 CAP1Q01518 475 aa5.97□□□□□ -1.45
ECHDC1-201ENST00000368287 TAGLNQ01995 201 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-201ENST00000368287 FMR1Q06787 632 aaKnown RBP eCLIP5.97□□□□□ -1.45
ECHDC1-201ENST00000368287 FERMT3Q86UX7 667 aa5.97□□□□□ -1.45
ECHDC1-201ENST00000368287 SETDB2Q96T68 719 aa5.97□□□□□ -1.45
ECHDC1-201ENST00000368287 FOXP3Q9BZS1 431 aa5.97□□□□□ -1.45
ECHDC1-201ENST00000368287 PLCG1P19174 1290 aa5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 RTP1P59025 263 aa5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 RPL6Q02878 288 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 NMIQ13287 307 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 CCDC85BQ15834 202 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 TSNAXIP1Q2TAA8 658 aa5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 NT5DC1Q5TFE4 455 aa5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 USHBP1Q8N6Y0 703 aa5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 ENOX1Q8TC92 643 aaKnown RBP5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 SYTL5Q8TDW5 730 aaPredicted RBP5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 CORINQ9Y5Q5 1042 aa5.96□□□□□ -1.46
ECHDC1-201ENST00000368287 TAF6LQ9Y6J9 622 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms