RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 F5H6K3 240 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 RGS19P49795 217 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 KLRC3Q07444 240 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 RAET1EQ8TD07 263 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 ARMC5Q96C12 935 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 GOPCQ9HD26 462 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 TXNRD2Q9NNW7 524 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 INCENPQ9NQS7 918 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
CD48-202ENST00000368046 NAV1Q8NEY1 1877 aa11.69□□□□□ -0.54
CD48-202ENST00000368046 ATAD5Q96QE3 1844 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 TSPY2A6NKD2 308 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 ZNF213O14771 459 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 WDR46O15213 610 aaKnown RBP11.68□□□□□ -0.54
CD48-202ENST00000368046 ORC4O43929 436 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 TTLL1O95922 423 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 CHMLP26374 656 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 FLT3LGP49771 235 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 ERVK-9P63128 1117 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 ERVK-24P63145 666 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 PRKCZQ05513 592 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 IRF5Q13568 498 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 SLC9C1Q4G0N8 1177 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 CCAR1Q8IX12 1150 aaKnown RBP11.68□□□□□ -0.54
CD48-202ENST00000368046 SPICE1Q8N0Z3 855 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 RUFY2Q8WXA3 655 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 CEP95Q96GE4 821 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 PAGR1Q9BTK6 254 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 DSCC1Q9BVC3 393 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 GJD2Q9UKL4 321 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 GABRQQ9UN88 632 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
CD48-202ENST00000368046 BAZ2AQ9UIF9 1905 aaKnown RBP11.67□□□□□ -0.54
CD48-202ENST00000368046 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
CD48-202ENST00000368046 RANBP6O60518 1105 aaKnown RBP11.67□□□□□ -0.54
CD48-202ENST00000368046 PEX10O60683 326 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 CNMDO75829 334 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 NEFLP07196 543 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 PCP11498 1178 aaKnown RBP11.67□□□□□ -0.54
CD48-202ENST00000368046 MAPK4P31152 587 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 GRK4P32298 578 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 CCNA1P78396 465 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 MFSD6Q6ZSS7 791 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 PXYLP1Q8TE99 480 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 ZNF333Q96JL9 665 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 CCDC136Q96JN2 1154 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 RNF41Q9H4P4 317 aaPredicted RBP11.67□□□□□ -0.54
CD48-202ENST00000368046 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
CD48-202ENST00000368046 RAD21O60216 631 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 FLOT1O75955 427 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 CENPBP07199 599 aaPredicted RBP11.66□□□□□ -0.54
CD48-202ENST00000368046 HAND2P61296 217 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 AKNAD1Q5T1N1 836 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 PDCD7Q8N8D1 485 aaKnown RBP11.66□□□□□ -0.54
CD48-202ENST00000368046 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 PORCNQ9H237 461 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 IL17RBQ9NRM6 502 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 TOMM22Q9NS69 142 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 TCP11L1Q9NUJ3 509 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 ADAMTS5Q9UNA0 930 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 LOC285556D6RIA3 1793 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 PTPRFP10586 1907 aa11.66□□□□□ -0.54
CD48-202ENST00000368046 ADCY3O60266 1144 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 PYGBP11216 843 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 NOVP48745 357 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 NT5C2P49902 561 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 SOX10P56693 466 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 IMMTQ16891 758 aaKnown RBP11.65□□□□□ -0.54
CD48-202ENST00000368046 RRP12Q5JTH9 1297 aaKnown RBP11.65□□□□□ -0.54
CD48-202ENST00000368046 FAM83BQ5T0W9 1011 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 GPR142Q7Z601 462 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 PLEKHH3Q7Z736 793 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.54
CD48-202ENST00000368046 GMCL1P1Q8NEA9 526 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 STAG1Q8WVM7 1258 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 TTC14Q96N46 770 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 NUDT12Q9BQG2 462 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 IL25Q9H293 177 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 BIN2Q9UBW5 565 aaPredicted RBP11.65□□□□□ -0.54
CD48-202ENST00000368046 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 STX8Q9UNK0 236 aa11.65□□□□□ -0.54
CD48-202ENST00000368046 PLIN4Q96Q06 1357 aa11.65□□□□□ -0.55
CD48-202ENST00000368046 RAD50Q92878 1312 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 STRNO43815 780 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 NDUFB10O96000 172 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 UBXN2AP68543 259 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 SLFN13Q68D06 897 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 ESR2Q92731 530 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 ATG4CQ96DT6 458 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 SPATC1LQ9H0A9 340 aa11.64□□□□□ -0.55
CD48-202ENST00000368046 CWC22Q9HCG8 908 aaKnown RBP11.64□□□□□ -0.55
CD48-202ENST00000368046 FBXO28Q9NVF7 368 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms