RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 TSEN34Q9BSV6 310 aaKnown RBP18.02■□□□□ 0.48
VAMP4-202ENST00000367740 SYNRGQ9UMZ2 1314 aa18.01■□□□□ 0.47
VAMP4-202ENST00000367740 COG2Q14746 738 aa18.01■□□□□ 0.47
VAMP4-202ENST00000367740 TMEM199Q8N511 208 aa18.01■□□□□ 0.47
VAMP4-202ENST00000367740 NUP133Q8WUM0 1156 aa18.01■□□□□ 0.47
VAMP4-202ENST00000367740 HERVK_113Q902F9 699 aa18.01■□□□□ 0.47
VAMP4-202ENST00000367740 NEUROD6Q96NK8 337 aa18.01■□□□□ 0.47
VAMP4-202ENST00000367740 MROH8Q9H579 483 aa18.01■□□□□ 0.47
VAMP4-202ENST00000367740 ZNF521Q96K83 1311 aa18■□□□□ 0.47
VAMP4-202ENST00000367740 ZNF865P0CJ78 1059 aaPredicted RBP18■□□□□ 0.47
VAMP4-202ENST00000367740 AKR1A1P14550 325 aa18■□□□□ 0.47
VAMP4-202ENST00000367740 SKIV2LQ15477 1246 aaKnown RBP18■□□□□ 0.47
VAMP4-202ENST00000367740 NCAPG2Q86XI2 1143 aa18■□□□□ 0.47
VAMP4-202ENST00000367740 PPP1R12CQ9BZL4 782 aa18■□□□□ 0.47
VAMP4-202ENST00000367740 MROH7Q68CQ1 1323 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 MOXD2PA6NHM9 499 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 GUCY1A2P33402 732 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 PLS1Q14651 629 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 ABCB5Q2M3G0 1257 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 CCSAPQ6IQ19 270 aaPredicted RBP17.99■□□□□ 0.47
VAMP4-202ENST00000367740 KLHDC9Q8NEP7 349 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 TINF2Q9BSI4 451 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 TANGO6Q9C0B7 1094 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 HOXC10Q9NYD6 342 aa17.99■□□□□ 0.47
VAMP4-202ENST00000367740 APBB1O00213 710 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 TLL1O43897 1013 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 FCER1AP12319 257 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 MRE11P49959 708 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 CDK7P50613 346 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 CERKLQ49MI3 558 aaPredicted RBP17.98■□□□□ 0.47
VAMP4-202ENST00000367740 GORABQ5T7V8 394 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 PPP2R2DQ66LE6 453 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 MB21D1Q8N884 522 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 CDCA7LQ96GN5 454 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 EHD4Q9H223 541 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 IL23AQ9NPF7 189 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 SERPINB13Q9UIV8 391 aa17.98■□□□□ 0.47
VAMP4-202ENST00000367740 NAV1Q8NEY1 1877 aa17.97■□□□□ 0.47
VAMP4-202ENST00000367740 A0A1W2PRG0 241 aa17.97■□□□□ 0.47
VAMP4-202ENST00000367740 MYADML2A6NDP7 307 aa17.97■□□□□ 0.47
VAMP4-202ENST00000367740 PGK2P07205 417 aa17.97■□□□□ 0.47
VAMP4-202ENST00000367740 RABGGTBP53611 331 aa17.97■□□□□ 0.47
VAMP4-202ENST00000367740 DYNLL1P63167 89 aaKnown RBP17.97■□□□□ 0.47
VAMP4-202ENST00000367740 KCNA10Q16322 511 aa17.97■□□□□ 0.47
VAMP4-202ENST00000367740 ELP1O95163 1332 aa17.97■□□□□ 0.47
VAMP4-202ENST00000367740 MYOGP15173 224 aa17.96■□□□□ 0.47
VAMP4-202ENST00000367740 SHMT1P34896 483 aa17.96■□□□□ 0.47
VAMP4-202ENST00000367740 KIAA1755Q5JYT7 1200 aa17.96■□□□□ 0.47
VAMP4-202ENST00000367740 FAM126BQ8IXS8 530 aa17.96■□□□□ 0.47
VAMP4-202ENST00000367740 ATG4CQ96DT6 458 aa17.96■□□□□ 0.47
VAMP4-202ENST00000367740 MTIF3Q9H2K0 278 aaKnown RBP17.96■□□□□ 0.47
VAMP4-202ENST00000367740 SNRKQ9NRH2 765 aa17.96■□□□□ 0.47
VAMP4-202ENST00000367740 MTCH2Q9Y6C9 303 aa17.96■□□□□ 0.47
VAMP4-202ENST00000367740 COL4A4P53420 1690 aaPredicted RBP17.96■□□□□ 0.47
VAMP4-202ENST00000367740 UQCRFS1P1P0C7P4 283 aa17.95■□□□□ 0.46
VAMP4-202ENST00000367740 POU3F3P20264 500 aaPredicted RBP17.95■□□□□ 0.46
VAMP4-202ENST00000367740 CYP2C18P33260 490 aa17.95■□□□□ 0.46
VAMP4-202ENST00000367740 IRX5P78411 483 aaPredicted RBP17.95■□□□□ 0.46
VAMP4-202ENST00000367740 SEPT2Q15019 361 aa17.95■□□□□ 0.46
VAMP4-202ENST00000367740 ZNF792Q3KQV3 632 aa17.95■□□□□ 0.46
VAMP4-202ENST00000367740 GLT1D1Q96MS3 346 aa17.95■□□□□ 0.46
VAMP4-202ENST00000367740 CABP5Q9NP86 173 aa17.95■□□□□ 0.46
VAMP4-202ENST00000367740 COG5Q9UP83 839 aa17.95■□□□□ 0.46
VAMP4-202ENST00000367740 MYH8P13535 1937 aa17.94■□□□□ 0.46
VAMP4-202ENST00000367740 PI4K2BG5E9Z4 385 aa17.94■□□□□ 0.46
VAMP4-202ENST00000367740 FGBP02675 491 aa17.94■□□□□ 0.46
VAMP4-202ENST00000367740 CST5P28325 142 aaPredicted RBP17.94■□□□□ 0.46
VAMP4-202ENST00000367740 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
VAMP4-202ENST00000367740 MMP19Q99542 508 aa17.94■□□□□ 0.46
VAMP4-202ENST00000367740 DIS3Q9Y2L1 958 aaKnown RBP17.94■□□□□ 0.46
VAMP4-202ENST00000367740 A0A0U1RQG5 324 aaPredicted RBP17.93■□□□□ 0.46
VAMP4-202ENST00000367740 SMIM22K7EJ46 135 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 ARVCFO00192 962 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 RFXAPO00287 272 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 CYP2E1P05181 493 aaPredicted RBP17.93■□□□□ 0.46
VAMP4-202ENST00000367740 TMEM132BQ14DG7 1078 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 KRT40Q6A162 431 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 CD320Q9NPF0 282 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 CNPY2Q9Y2B0 182 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 PCDHA11Q9Y5I1 949 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 MCM3APO60318 1980 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 UMODL1Q5DID0 1318 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 USP34Q70CQ2 3546 aa17.93■□□□□ 0.46
VAMP4-202ENST00000367740 BRWD1Q9NSI6 2320 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 PRR33A8MZF0 331 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 SRGAP3O43295 1099 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 FLOT1O75955 427 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 SLC25A27O95847 323 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 CD4P01730 458 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 ASGR1P07306 291 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 MEIS3Q99687 375 aa17.92■□□□□ 0.46
VAMP4-202ENST00000367740 EPOPA6NHQ4 379 aa17.91■□□□□ 0.46
VAMP4-202ENST00000367740 TLR3O15455 904 aaKnown RBP17.91■□□□□ 0.46
VAMP4-202ENST00000367740 ADCY6O43306 1168 aa17.91■□□□□ 0.46
VAMP4-202ENST00000367740 GTPBP6O43824 516 aaPredicted RBP17.91■□□□□ 0.46
VAMP4-202ENST00000367740 USP5P45974 858 aa17.91■□□□□ 0.46
VAMP4-202ENST00000367740 PLCD1P51178 756 aa17.91■□□□□ 0.46
VAMP4-202ENST00000367740 FAM184BQ9ULE4 1060 aa17.91■□□□□ 0.46
VAMP4-202ENST00000367740 DUSP11O75319 330 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms