RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 VCAM1P19320 739 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 CYP7A1P22680 504 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 CCNA1P78396 465 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 ATP8B2P98198 1209 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 CATSPERGQ6ZRH7 1159 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 CCAR1Q8IX12 1150 aaKnown RBP11.97□□□□□ -0.49
NUP43-203ENST00000367404 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 EDC3Q96F86 508 aaKnown RBP11.97□□□□□ -0.49
NUP43-203ENST00000367404 FLRT1Q9NZU1 646 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 SERPINB13Q9UIV8 391 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 CDK5RAP2Q96SN8 1893 aa11.97□□□□□ -0.49
NUP43-203ENST00000367404 MSCO60682 206 aa11.96□□□□□ -0.49
NUP43-203ENST00000367404 GLRX3O76003 335 aaKnown RBP11.96□□□□□ -0.49
NUP43-203ENST00000367404 MFSD14CQ5VZR4 134 aa11.96□□□□□ -0.49
NUP43-203ENST00000367404 FAM109BQ6ICB4 259 aaPredicted RBP11.96□□□□□ -0.49
NUP43-203ENST00000367404 ACER1Q8TDN7 264 aa11.96□□□□□ -0.49
NUP43-203ENST00000367404 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
NUP43-203ENST00000367404 FEZ1Q99689 392 aa11.96□□□□□ -0.49
NUP43-203ENST00000367404 BTBD7Q9P203 1132 aa11.96□□□□□ -0.49
NUP43-203ENST00000367404 DDX20Q9UHI6 824 aaKnown RBP11.96□□□□□ -0.49
NUP43-203ENST00000367404 DNM1LO00429 736 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 SURF6O75683 361 aaKnown RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 IDH1O75874 414 aaKnown RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 GUCY1A2P33402 732 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 SHMT1P34896 483 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 USP5P45974 858 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 OS9Q13438 667 aaPredicted RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 ZYXQ15942 572 aaKnown RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 MIGA1Q8NAN2 632 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 LPAR1Q92633 364 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 EAF2Q96CJ1 260 aaPredicted RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 RIOK1Q9BRS2 568 aaKnown RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 CWC22Q9HCG8 908 aaKnown RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 ZNF236Q9UL36 1845 aa11.95□□□□□ -0.5
NUP43-203ENST00000367404 SPTBN5Q9NRC6 3674 aaKnown RBP11.95□□□□□ -0.5
NUP43-203ENST00000367404 CCER2I3L3R5 266 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 CYBAP13498 195 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 GABPAQ06546 454 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 ABCB5Q2M3G0 1257 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
NUP43-203ENST00000367404 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 TTC6Q86TZ1 520 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 MAGEB6Q8N7X4 407 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 TRPV1Q8NER1 839 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 NPLOC4Q8TAT6 608 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 GUCD1Q96NT3 240 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 CCDC8Q9H0W5 538 aaPredicted RBP11.94□□□□□ -0.5
NUP43-203ENST00000367404 RPAP3Q9H6T3 665 aaPredicted RBP11.94□□□□□ -0.5
NUP43-203ENST00000367404 ANTXR1Q9H6X2 564 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 NDUFB9Q9Y6M9 179 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 FRMPD3Q5JV73 1810 aa11.94□□□□□ -0.5
NUP43-203ENST00000367404 CYP2C19P33261 490 aa11.93□□□□□ -0.5
NUP43-203ENST00000367404 PLCD1P51178 756 aa11.93□□□□□ -0.5
NUP43-203ENST00000367404 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
NUP43-203ENST00000367404 OLFML2BQ68BL8 750 aa11.93□□□□□ -0.5
NUP43-203ENST00000367404 SENP6Q9GZR1 1112 aaPredicted RBP11.93□□□□□ -0.5
NUP43-203ENST00000367404 C1orf115Q9H7X2 142 aa11.93□□□□□ -0.5
NUP43-203ENST00000367404 SEPT9Q9UHD8 586 aaPredicted RBP11.93□□□□□ -0.5
NUP43-203ENST00000367404 IVNS1ABPQ9Y6Y0 642 aa11.93□□□□□ -0.5
NUP43-203ENST00000367404 A0A0G2JMZ2 1700 aa11.93□□□□□ -0.5
NUP43-203ENST00000367404 A0A1W2PRG0 241 aa11.92□□□□□ -0.5
NUP43-203ENST00000367404 ATP2B2Q01814 1243 aa11.92□□□□□ -0.5
NUP43-203ENST00000367404 SNX17Q15036 470 aa11.92□□□□□ -0.5
NUP43-203ENST00000367404 WDR78Q5VTH9 848 aa11.92□□□□□ -0.5
NUP43-203ENST00000367404 SHCBP1Q8NEM2 672 aa11.92□□□□□ -0.5
NUP43-203ENST00000367404 MOV10L1Q9BXT6 1211 aaKnown RBP11.92□□□□□ -0.5
NUP43-203ENST00000367404 CABP5Q9NP86 173 aa11.92□□□□□ -0.5
NUP43-203ENST00000367404 VCANP13611 3396 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 EYSQ5T1H1 3165 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 ADORA2AP29274 412 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 RTP1P59025 263 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 SEPT2Q15019 361 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 CEP85Q6P2H3 762 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 ANKK1Q8NFD2 765 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 ZFRQ96KR1 1074 aaKnown RBP11.91□□□□□ -0.5
NUP43-203ENST00000367404 LBHD1Q9BQE6 289 aaPredicted RBP11.91□□□□□ -0.5
NUP43-203ENST00000367404 SPATC1LQ9H0A9 340 aa11.91□□□□□ -0.5
NUP43-203ENST00000367404 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
NUP43-203ENST00000367404 SEPT4O43236 478 aa11.9□□□□□ -0.5
NUP43-203ENST00000367404 STRNO43815 780 aa11.9□□□□□ -0.5
NUP43-203ENST00000367404 RLBP1P12271 317 aa11.9□□□□□ -0.5
NUP43-203ENST00000367404 CNGA1P29973 690 aa11.9□□□□□ -0.5
NUP43-203ENST00000367404 COG2Q14746 738 aa11.9□□□□□ -0.5
NUP43-203ENST00000367404 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.9□□□□□ -0.5
NUP43-203ENST00000367404 ABRAQ8N0Z2 381 aa11.9□□□□□ -0.5
NUP43-203ENST00000367404 COL25A1Q9BXS0 654 aaPredicted RBP11.9□□□□□ -0.5
NUP43-203ENST00000367404 MYO5AQ9Y4I1 1855 aaKnown RBP11.9□□□□□ -0.5
NUP43-203ENST00000367404 MAGEB6P1A0A0J9YX57 407 aa11.89□□□□□ -0.51
NUP43-203ENST00000367404 COBLO75128 1261 aa11.89□□□□□ -0.51
NUP43-203ENST00000367404 POLR3DP05423 398 aaPredicted RBP11.89□□□□□ -0.51
NUP43-203ENST00000367404 PDE6AP16499 860 aa11.89□□□□□ -0.51
NUP43-203ENST00000367404 ERCC3P19447 782 aa11.89□□□□□ -0.51
NUP43-203ENST00000367404 TTF1Q15361 905 aaPredicted RBP11.89□□□□□ -0.51
NUP43-203ENST00000367404 KIAA1755Q5JYT7 1200 aa11.89□□□□□ -0.51
NUP43-203ENST00000367404 C1orf53Q5VUE5 145 aa11.89□□□□□ -0.51
NUP43-203ENST00000367404 SLC39A5Q6ZMH5 540 aa11.89□□□□□ -0.51
NUP43-203ENST00000367404 DPP9Q86TI2 863 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms