RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 SLC35F6Q8N357 371 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 BACH1O14867 736 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 MAEAQ7L5Y9 396 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 NUCKS1Q9H1E3 243 aaKnown RBP12.73□□□□□ -0.37
RD3-201ENST00000367002 SAMSN1Q9NSI8 373 aaKnown RBP12.73□□□□□ -0.37
RD3-201ENST00000367002 CYP2E1P05181 493 aaPredicted RBP12.73□□□□□ -0.37
RD3-201ENST00000367002 OR52Z1P0C646 297 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 CDC25AP30304 524 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 C6orf163Q5TEZ5 329 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 SRGAP1Q7Z6B7 1085 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 MYOCDQ8IZQ8 938 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 RBM17Q96I25 401 aaKnown RBP12.73□□□□□ -0.37
RD3-201ENST00000367002 SLC39A2Q9NP94 309 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
RD3-201ENST00000367002 UTP11Q9Y3A2 253 aaKnown RBP12.73□□□□□ -0.37
RD3-201ENST00000367002 ARHGEF35A5YM69 484 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 CALUO43852 315 aaPredicted RBP12.72□□□□□ -0.37
RD3-201ENST00000367002 EXOC3O60645 756 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 FMNL1O95466 1100 aaPredicted RBP12.72□□□□□ -0.37
RD3-201ENST00000367002 SLFN14P0C7P3 912 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 NEK8Q86SG6 692 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 CTTNBP2NLQ9P2B4 639 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 BIRC3Q13489 604 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 ENOX1Q8TC92 643 aaKnown RBP12.72□□□□□ -0.37
RD3-201ENST00000367002 CABS1Q96KC9 395 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 GCNT3O95395 438 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 TCP10Q12799 353 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 NT5C3AQ9H0P0 336 aa12.72□□□□□ -0.37
RD3-201ENST00000367002 MKRN1Q9UHC7 482 aaKnown RBP12.72□□□□□ -0.37
RD3-201ENST00000367002 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 SH2B2O14492 632 aaPredicted RBP12.71□□□□□ -0.37
RD3-201ENST00000367002 ENC1O14682 589 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 SEC31AO94979 1220 aaKnown RBP12.71□□□□□ -0.37
RD3-201ENST00000367002 LONP1P36776 959 aaKnown RBP12.71□□□□□ -0.37
RD3-201ENST00000367002 USH1GQ495M9 461 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 RBM26Q5T8P6 1007 aaKnown RBP12.71□□□□□ -0.37
RD3-201ENST00000367002 MYCT1Q8N699 235 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 MRPL44Q9H9J2 332 aaKnown RBP12.71□□□□□ -0.37
RD3-201ENST00000367002 PDE11AQ9HCR9 933 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 SEC31BQ9NQW1 1179 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 MMP1P03956 469 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 KRT5P13647 590 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 TCP1P17987 556 aaKnown RBP12.71□□□□□ -0.37
RD3-201ENST00000367002 RASGRP4Q8TDF6 673 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 TUBGCP2Q9BSJ2 902 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 MAN1B1Q9UKM7 699 aa12.71□□□□□ -0.37
RD3-201ENST00000367002 H7C1W4 665 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 DDAH1O94760 285 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 LIFRP42702 1097 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 ZYXQ15942 572 aaKnown RBP12.71□□□□□ -0.38
RD3-201ENST00000367002 KRT71Q3SY84 523 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 RDH13Q8NBN7 331 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 FERMT1Q9BQL6 677 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 FAM170AA1A519 330 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 CFBP00751 764 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 GUCY2FP51841 1108 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 RBL2Q08999 1139 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 FAM98CQ17RN3 349 aaKnown RBP12.71□□□□□ -0.38
RD3-201ENST00000367002 LONRF2Q1L5Z9 754 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 DPH6Q7L8W6 267 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 FNBP1Q96RU3 617 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 NKIRAS1Q9NYS0 192 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 HYOU1Q9Y4L1 999 aa12.71□□□□□ -0.38
RD3-201ENST00000367002 KIF1BO60333 1816 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 GTF2IP78347 998 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 VSTM4Q8IW00 320 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 ATP8A2Q9NTI2 1148 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.7□□□□□ -0.38
RD3-201ENST00000367002 CEP83Q9Y592 693 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 PCDHB6Q9Y5E3 794 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 BUB1O43683 1085 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 ARMCX3Q9UH62 379 aaPredicted RBP12.7□□□□□ -0.38
RD3-201ENST00000367002 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
RD3-201ENST00000367002 XRCC5P13010 732 aaKnown RBP12.7□□□□□ -0.38
RD3-201ENST00000367002 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 SF3A3Q12874 501 aaKnown RBP eCLIP12.7□□□□□ -0.38
RD3-201ENST00000367002 SARM1Q6SZW1 724 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 LCORLQ8N3X6 602 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 UBL4BQ8N7F7 174 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 PPM1EQ8WY54 764 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
RD3-201ENST00000367002 PARP3Q9Y6F1 533 aa12.7□□□□□ -0.38
RD3-201ENST00000367002 MAP3K4Q9Y6R4 1608 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 NLRP1Q9C000 1473 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 IL6STP40189 918 aaPredicted RBP12.69□□□□□ -0.38
RD3-201ENST00000367002 STAT1P42224 750 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 MXRA7P84157 204 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 PTPROQ16827 1216 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 ARHGAP44Q17R89 818 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 GPBP1Q86WP2 473 aa12.69□□□□□ -0.38
RD3-201ENST00000367002 LOC102724428A0A0B4J2F2 783 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms