RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZNF296Q8WUU4 475 aaPredicted RBP10.53□□□□□ -0.72
YBX3-204ENST00000366290 KCNQ5Q9NR82 932 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 PCDHB5Q9Y5E4 795 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 CGNL1Q0VF96 1302 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 OVOS2A0A0G2JMS6 1433 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 C1QTNF9BB2RNN3 333 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 GSTP1P09211 210 aaKnown RBP10.52□□□□□ -0.73
YBX3-204ENST00000366290 SPATA31C1P0DKV0 1188 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 GARTP22102 1010 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 HOXC9P31274 260 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 GNL2Q13823 731 aaKnown RBP10.52□□□□□ -0.73
YBX3-204ENST00000366290 POU4F3Q15319 338 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 SNAP47Q5SQN1 464 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 FBXL19Q6PCT2 694 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 PTF1AQ7RTS3 328 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 TRIM42Q8IWZ5 723 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 PARD3Q8TEW0 1356 aa10.52□□□□□ -0.73
YBX3-204ENST00000366290 TNS2Q63HR2 1409 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 A0A0A0MRY4 1105 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 MAOBP27338 520 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 GJA8P48165 433 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 NLRP12P59046 1061 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 DDB1Q16531 1140 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 GOLM1Q8NBJ4 401 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 CORO1BQ9BR76 489 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 MIR1-1HGQ9H1L0 117 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 SUPT16HQ9Y5B9 1047 aaKnown RBP10.51□□□□□ -0.73
YBX3-204ENST00000366290 NSD2O96028 1365 aa10.51□□□□□ -0.73
YBX3-204ENST00000366290 RGPD3A6NKT7 1758 aaPredicted RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 RGPD4Q7Z3J3 1758 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 UTRNP46939 3433 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 MAP2P11137 1827 aaKnown RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 DDX3YO15523 660 aaKnown RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 ADAM11O75078 769 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 ECEL1O95672 775 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 FBLN1P23142 703 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 CD68P34810 354 aaPredicted RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 RAC1P63000 192 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 SEPT6Q14141 434 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 FOXD4L6Q3SYB3 417 aaPredicted RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 FOXD4L3Q6VB84 417 aaPredicted RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 FMR1NBQ8N0W7 255 aaPredicted RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 SLC43A3Q8NBI5 491 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 KCNB2Q92953 911 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 GAL3ST3Q96A11 431 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 GPRASP2Q96D09 838 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 POLR3GLQ9BT43 218 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 USP26Q9BXU7 913 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 ZC3H12CQ9C0D7 883 aaKnown RBP10.5□□□□□ -0.73
YBX3-204ENST00000366290 INSRP06213 1382 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 FLT4P35916 1363 aa10.5□□□□□ -0.73
YBX3-204ENST00000366290 RGPD2P0DJD1 1756 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 FAM229AH3BQW9 127 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 GREM1O60565 184 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 IL2RBP14784 551 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 AMPHP49418 695 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 RRS1Q15050 365 aaKnown RBP10.49□□□□□ -0.73
YBX3-204ENST00000366290 MAP1SQ66K74 1059 aaPredicted RBP10.49□□□□□ -0.73
YBX3-204ENST00000366290 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
YBX3-204ENST00000366290 FBXO11Q86XK2 927 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 MARCH10Q8NA82 808 aaPredicted RBP10.49□□□□□ -0.73
YBX3-204ENST00000366290 EAF1Q96JC9 268 aaPredicted RBP10.49□□□□□ -0.73
YBX3-204ENST00000366290 PANK3Q9H999 370 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
YBX3-204ENST00000366290 SPDYE3A6NKU9 549 aa10.48□□□□□ -0.73
YBX3-204ENST00000366290 EXOC5O00471 708 aa10.48□□□□□ -0.73
YBX3-204ENST00000366290 CTSBP07858 339 aa10.48□□□□□ -0.73
YBX3-204ENST00000366290 SCARA3Q6AZY7 606 aa10.48□□□□□ -0.73
YBX3-204ENST00000366290 MPRIPQ6WCQ1 1025 aa10.48□□□□□ -0.73
YBX3-204ENST00000366290 BNC2Q6ZN30 1099 aaPredicted RBP10.48□□□□□ -0.73
YBX3-204ENST00000366290 SREK1Q8WXA9 508 aaKnown RBP10.48□□□□□ -0.73
YBX3-204ENST00000366290 NT5C1AQ9BXI3 368 aa10.48□□□□□ -0.73
YBX3-204ENST00000366290 NCAPD2Q15021 1401 aa10.48□□□□□ -0.73
YBX3-204ENST00000366290 LOC100289279A0A1B0GTE1 492 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 DLL1O00548 723 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 PLSCR1O15162 318 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 F13A1P00488 732 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 RASGRP4Q8TDF6 673 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 JARID2Q92833 1246 aaPredicted RBP10.47□□□□□ -0.73
YBX3-204ENST00000366290 PDGFDQ9GZP0 370 aaPredicted RBP10.47□□□□□ -0.73
YBX3-204ENST00000366290 CCDC86Q9H6F5 360 aaKnown RBP10.47□□□□□ -0.73
YBX3-204ENST00000366290 KRT82Q9NSB4 513 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 CACNA2D2Q9NY47 1150 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 SMG6Q86US8 1419 aaKnown RBP10.47□□□□□ -0.73
YBX3-204ENST00000366290 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
YBX3-204ENST00000366290 PTPN11Q06124 597 aaPredicted RBP10.46□□□□□ -0.73
YBX3-204ENST00000366290 TRIM28Q13263 835 aaKnown RBP10.46□□□□□ -0.73
YBX3-204ENST00000366290 PDE3AQ14432 1141 aa10.46□□□□□ -0.73
YBX3-204ENST00000366290 HSP90AB2PQ58FF8 381 aa10.46□□□□□ -0.73
YBX3-204ENST00000366290 PRRT3Q5FWE3 981 aa10.46□□□□□ -0.73
YBX3-204ENST00000366290 GATAD2BQ8WXI9 593 aa10.46□□□□□ -0.73
YBX3-204ENST00000366290 UBP1Q9NZI7 540 aa10.46□□□□□ -0.73
YBX3-204ENST00000366290 NHSQ6T4R5 1651 aa10.45□□□□□ -0.74
YBX3-204ENST00000366290 KCNQ2O43526 872 aa10.45□□□□□ -0.74
YBX3-204ENST00000366290 NBPF6Q5VWK0 638 aa10.45□□□□□ -0.74
YBX3-204ENST00000366290 GPBAR1Q8TDU6 330 aa10.45□□□□□ -0.74
YBX3-204ENST00000366290 UBASH3BQ8TF42 649 aa10.45□□□□□ -0.74
YBX3-204ENST00000366290 NBPF4Q96M43 638 aa10.45□□□□□ -0.74
YBX3-204ENST00000366290 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
YBX3-204ENST00000366290 MEGF6O75095 1541 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms