RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 WDR78Q5VTH9 848 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ABRAQ8N0Z2 381 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 MROH8Q9H579 483 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 COLQQ9Y215 455 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 IVNS1ABPQ9Y6Y0 642 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PLIN4Q96Q06 1357 aa16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 COL11A1P12107 1806 aaPredicted RBP16.32■□□□□ 0.2
TNFRSF1A-202ENST00000366159 F5H6K3 240 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 VWA5AO00534 786 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 COBLO75128 1261 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PRDM1O75626 825 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ADORA2AP29274 412 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ATP2B2Q01814 1243 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 KLRC3Q07444 240 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NACAP1Q9BZK3 213 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PRO3102Q9H379 93 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ZNF287Q9HBT7 754 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CWC22Q9HCG8 908 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 MTMR4Q9NYA4 1195 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PPP1R9AQ9ULJ8 1098 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 SYNPO2Q9UMS6 1093 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 DNAH12Q6ZR08 3092 aa16.31■□□□□ 0.2
TNFRSF1A-202ENST00000366159 COL6A1P12109 1028 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PPARAQ07869 468 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 FAM83BQ5T0W9 1011 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 OLFML2BQ68BL8 750 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 TRPV1Q8NER1 839 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NEDD1Q8NHV4 660 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 EXOC6Q8TAG9 804 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ZBTB47Q9UFB7 747 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 TACC3Q9Y6A5 838 aa16.3■□□□□ 0.2
TNFRSF1A-202ENST00000366159 SLC25A27O95847 323 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NDUFB10O96000 172 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ALX1Q15699 326 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 MFSD14CQ5VZR4 134 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NAPBQ9H115 298 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 OSBPL3Q9H4L5 887 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 HELLSQ9NRZ9 838 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ANAPC4Q9UJX5 808 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NR2E3Q9Y5X4 410 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 FRMPD3Q5JV73 1810 aa16.29■□□□□ 0.2
TNFRSF1A-202ENST00000366159 MYH4Q9Y623 1939 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 FGRP09769 529 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CYBAP13498 195 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CYP2C19P33261 490 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NUCB1Q02818 461 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PDE4BQ07343 736 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PLS1Q14651 629 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NCAPG2Q86XI2 1143 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 GMCL1P1Q8NEA9 526 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PFASO15067 1338 aa16.28■□□□□ 0.2
TNFRSF1A-202ENST00000366159 SZT2Q5T011 3432 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 EVI5O60447 810 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 TTLL1O95922 423 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 STAT3P40763 770 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 NOVP48745 357 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 TFAP4Q01664 338 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 CHD1LQ86WJ1 897 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PLEKHM2Q8IWE5 1019 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 PRPF38AQ8NAV1 312 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 FAM227BQ96M60 508 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 C11orf49Q9H6J7 331 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 INCENPQ9NQS7 918 aa16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1A-202ENST00000366159 A0A0D9SFI3 127 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 ATP2A1O14983 1001 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 FCER1AP12319 257 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 IL17RBQ9NRM6 502 aa16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 DDX20Q9UHI6 824 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1A-202ENST00000366159 MSCO60682 206 aa16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 SLC3A2P08195 630 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 TSPY3P0CV98 308 aa16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 TSPY8P0CW00 308 aa16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 CTDSPL2Q05D32 466 aa16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 RBM27Q9P2N5 1060 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1A-202ENST00000366159 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms