RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 HOXC10Q9NYD6 342 aa16.19■□□□□ 0.18
NSMCE1-201ENST00000361439 CCDC69A6NI79 296 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 DDAH1O94760 285 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 CALM1P0DP23 149 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 CALM2P0DP24 149 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 CALM3P0DP25 149 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 PDHBP11177 359 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 BMP3P12645 472 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 FGD1P98174 961 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 COG2Q14746 738 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 KIAA1755Q5JYT7 1200 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 SPICE1Q8N0Z3 855 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 TBC1D32Q96NH3 1257 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 ASCC2Q9H1I8 757 aaPredicted RBP16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 ZFYVE28Q9HCC9 887 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 RNF186Q9NXI6 227 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
NSMCE1-201ENST00000361439 MYH4Q9Y623 1939 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 FDX1P10109 184 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 TROAPQ12815 778 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 PPP2R5BQ15173 497 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 ANKRD1Q15327 319 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 TAF1CQ15572 869 aaPredicted RBP16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 SYNE3Q6ZMZ3 975 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 FAM160B2Q86V87 743 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 CHURC1Q8WUH1 139 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 TANGO6Q9C0B7 1094 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 SLC12A7Q9Y666 1083 aa16.17■□□□□ 0.18
NSMCE1-201ENST00000361439 RAD21O60216 631 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 TLR2O60603 784 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 EVCP57679 992 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 DGKZQ13574 1117 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 COL9A3Q14050 684 aaPredicted RBP16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 FAM83BQ5T0W9 1011 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 BTNL9Q6UXG8 535 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 NFXL1Q6ZNB6 911 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 Q6ZUG5 572 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 MB21D1Q8N884 522 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 PRPF38AQ8NAV1 312 aaKnown RBP16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 PDRG1Q9NUG6 133 aa16.16■□□□□ 0.18
NSMCE1-201ENST00000361439 FLOT1O75955 427 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 PARP1P09874 1014 aaKnown RBP16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 KIF5BP33176 963 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 STAT2P52630 851 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 RABEP1Q15276 862 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 ZNF654Q8IZM8 581 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 SLF1Q9BQI6 1058 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 UPF3BQ9BZI7 483 aaKnown RBP16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 PCNTO95613 3336 aa16.15■□□□□ 0.18
NSMCE1-201ENST00000361439 TMEM232C9JQI7 657 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 TRPA1O75762 1119 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 DSG3P32926 999 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 GNAQP50148 359 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 HERVK_113P62684 666 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 CRHR2Q13324 411 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 CCDC96Q2M329 555 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 P2RX7Q99572 595 aaKnown RBP16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 KIF2CQ99661 725 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 LZTS2Q9BRK4 669 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 LRRC2Q9BYS8 371 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 SENP2Q9HC62 589 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 RABGAP1Q9Y3P9 1069 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
NSMCE1-201ENST00000361439 PALM3A6NDB9 673 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 SPDYE16A6NNV3 312 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 CYP2C8P10632 490 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 CPA1P15085 419 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 SMARCA1P28370 1054 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 NEK4P51957 841 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 GRM4Q14833 912 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 APOA5Q6Q788 366 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 C17orf99Q6UX52 265 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 CTCFLQ8NI51 663 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 BRF1Q92994 677 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 TCEANC2Q96MN5 208 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 NUP88Q99567 741 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 PNMA2Q9UL42 364 aa16.13■□□□□ 0.17
NSMCE1-201ENST00000361439 CCDC196A0A1B0GTZ2 297 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 ZBTB43O43298 467 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 TOB2Q14106 344 aaPredicted RBP16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 FAM110CQ1W6H9 321 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 KCTD1Q719H9 257 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 FANCBQ8NB91 859 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 RBM28Q9NW13 759 aaKnown RBP16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 MORF4L1Q9UBU8 362 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 MAD2L2Q9UI95 211 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 NID2Q14112 1375 aa16.12■□□□□ 0.17
NSMCE1-201ENST00000361439 KLF18A0A0U1RQI7 1052 aa16.11■□□□□ 0.17
NSMCE1-201ENST00000361439 VWA5AO00534 786 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms