RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 TRIM60Q495X7 471 aa25.44■■□□□ 1.66
CD47-202ENST00000361309 FAM161BQ96MY7 647 aa25.44■■□□□ 1.66
CD47-202ENST00000361309 GUCD1Q96NT3 240 aa25.44■■□□□ 1.66
CD47-202ENST00000361309 PRDM5Q9NQX1 630 aaPredicted RBP25.44■■□□□ 1.66
CD47-202ENST00000361309 USP17L12C9JPN9 530 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 USP17L21D6R901 530 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 SLC25A27O95847 323 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 ATP5JP18859 108 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 ADCYAP1R1P41586 468 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 SNX17Q15036 470 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 LRRC41Q15345 812 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 AMOTL1Q8IY63 956 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 MIER1Q8N108 512 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 FERMT2Q96AC1 680 aa25.43■■□□□ 1.66
CD47-202ENST00000361309 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.43■■□□□ 1.66
CD47-202ENST00000361309 EEF2P13639 858 aaKnown RBP25.42■■□□□ 1.66
CD47-202ENST00000361309 FAM47AQ5JRC9 791 aa25.42■■□□□ 1.66
CD47-202ENST00000361309 C16orf86Q6ZW13 317 aa25.42■■□□□ 1.66
CD47-202ENST00000361309 HAUS7Q99871 368 aa25.42■■□□□ 1.66
CD47-202ENST00000361309 ZBTB40Q9NUA8 1239 aa25.42■■□□□ 1.66
CD47-202ENST00000361309 FBXO28Q9NVF7 368 aa25.42■■□□□ 1.66
CD47-202ENST00000361309 ADAMTS5Q9UNA0 930 aa25.42■■□□□ 1.66
CD47-202ENST00000361309 COG6Q9Y2V7 657 aa25.42■■□□□ 1.66
CD47-202ENST00000361309 SHHQ15465 462 aa25.41■■□□□ 1.66
CD47-202ENST00000361309 BADQ92934 168 aa25.41■■□□□ 1.66
CD47-202ENST00000361309 MMP19Q99542 508 aa25.41■■□□□ 1.66
CD47-202ENST00000361309 DDX19BQ9UMR2 479 aa25.41■■□□□ 1.66
CD47-202ENST00000361309 GREB1LQ9C091 1923 aaPredicted RBP25.41■■□□□ 1.66
CD47-202ENST00000361309 ZBED9Q6R2W3 1325 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 PGK2P07205 417 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 C9orf50Q5SZB4 431 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 ZNF697Q5TEC3 545 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 DDRGK1Q96HY6 314 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 KANSL2Q9H9L4 492 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 PDLIM7Q9NR12 457 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 SLC4A4Q9Y6R1 1079 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 EYSQ5T1H1 3165 aa25.4■■□□□ 1.66
CD47-202ENST00000361309 UBE3CQ15386 1083 aa25.39■■□□□ 1.66
CD47-202ENST00000361309 SH3RF1Q7Z6J0 888 aa25.39■■□□□ 1.66
CD47-202ENST00000361309 RIOX2Q8IUF8 465 aa25.39■■□□□ 1.66
CD47-202ENST00000361309 MYH4Q9Y623 1939 aa25.39■■□□□ 1.65
CD47-202ENST00000361309 TRIM43BA6NCK2 446 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 RAD21O60216 631 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 C1orf53Q5VUE5 145 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 CTR9Q6PD62 1173 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 TRIM43Q96BQ3 446 aaPredicted RBP25.38■■□□□ 1.65
CD47-202ENST00000361309 GOPCQ9HD26 462 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 XPNPEP3Q9NQH7 507 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 NRBP1Q9UHY1 535 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 PPP1R9AQ9ULJ8 1098 aa25.38■■□□□ 1.65
CD47-202ENST00000361309 VWA5AO00534 786 aa25.37■■□□□ 1.65
CD47-202ENST00000361309 RARBP10826 455 aa25.37■■□□□ 1.65
CD47-202ENST00000361309 STAT3P40763 770 aa25.37■■□□□ 1.65
CD47-202ENST00000361309 KCTD2Q14681 263 aa25.37■■□□□ 1.65
CD47-202ENST00000361309 FAM83BQ5T0W9 1011 aa25.37■■□□□ 1.65
CD47-202ENST00000361309 TINF2Q9BSI4 451 aa25.37■■□□□ 1.65
CD47-202ENST00000361309 PUS7LQ9H0K6 701 aaKnown RBP25.37■■□□□ 1.65
CD47-202ENST00000361309 PHF24Q9UPV7 400 aa25.37■■□□□ 1.65
CD47-202ENST00000361309 TAL1P17542 331 aaPredicted RBP25.36■■□□□ 1.65
CD47-202ENST00000361309 TLE2Q04725 743 aa25.36■■□□□ 1.65
CD47-202ENST00000361309 ZNF792Q3KQV3 632 aa25.36■■□□□ 1.65
CD47-202ENST00000361309 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.36■■□□□ 1.65
CD47-202ENST00000361309 ZNF214Q9UL59 606 aaPredicted RBP25.36■■□□□ 1.65
CD47-202ENST00000361309 DIS3Q9Y2L1 958 aaKnown RBP25.36■■□□□ 1.65
CD47-202ENST00000361309 MCM3APO60318 1980 aa25.35■■□□□ 1.65
CD47-202ENST00000361309 PGK1P00558 417 aa25.35■■□□□ 1.65
CD47-202ENST00000361309 ZSCAN25Q6NSZ9 544 aa25.35■■□□□ 1.65
CD47-202ENST00000361309 REPS2Q8NFH8 660 aa25.35■■□□□ 1.65
CD47-202ENST00000361309 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.35■■□□□ 1.65
CD47-202ENST00000361309 RNF180Q86T96 592 aa25.34■■□□□ 1.65
CD47-202ENST00000361309 COL25A1Q9BXS0 654 aaPredicted RBP25.34■■□□□ 1.65
CD47-202ENST00000361309 PRUNE2Q8WUY3 3088 aa25.34■■□□□ 1.65
CD47-202ENST00000361309 ZNF865P0CJ78 1059 aaPredicted RBP25.33■■□□□ 1.65
CD47-202ENST00000361309 COPB2P35606 906 aa25.33■■□□□ 1.65
CD47-202ENST00000361309 CDX2Q99626 313 aaPredicted RBP25.33■■□□□ 1.65
CD47-202ENST00000361309 SEMA6BQ9H3T3 888 aa25.33■■□□□ 1.65
CD47-202ENST00000361309 ARPP21Q9UBL0 812 aaPredicted RBP25.33■■□□□ 1.65
CD47-202ENST00000361309 TACC3Q9Y6A5 838 aa25.33■■□□□ 1.65
CD47-202ENST00000361309 ROBO3Q96MS0 1386 aa25.32■■□□□ 1.64
CD47-202ENST00000361309 SMARCA5O60264 1052 aaPredicted RBP25.32■■□□□ 1.64
CD47-202ENST00000361309 CLTBP09497 229 aa25.32■■□□□ 1.64
CD47-202ENST00000361309 ITGB8P26012 769 aa25.32■■□□□ 1.64
CD47-202ENST00000361309 STK11IPQ8N1F8 1099 aa25.32■■□□□ 1.64
CD47-202ENST00000361309 LENG1Q96BZ8 264 aaPredicted RBP25.32■■□□□ 1.64
CD47-202ENST00000361309 NUP88Q99567 741 aaPredicted RBP25.32■■□□□ 1.64
CD47-202ENST00000361309 CDH23Q9H251 3354 aa25.32■■□□□ 1.64
CD47-202ENST00000361309 A0A1W2PQ45 241 aaPredicted RBP25.31■■□□□ 1.64
CD47-202ENST00000361309 A0A1W2PQY0 241 aa25.31■■□□□ 1.64
CD47-202ENST00000361309 AKR1A1P14550 325 aa25.31■■□□□ 1.64
CD47-202ENST00000361309 SMAD3P84022 425 aaKnown RBP25.31■■□□□ 1.64
CD47-202ENST00000361309 STRBPQ96SI9 672 aaKnown RBP25.31■■□□□ 1.64
CD47-202ENST00000361309 LRRCC1Q9C099 1032 aa25.31■■□□□ 1.64
CD47-202ENST00000361309 CHMP4BQ9H444 224 aaKnown RBP25.31■■□□□ 1.64
CD47-202ENST00000361309 RASA1P20936 1047 aa25.3■■□□□ 1.64
CD47-202ENST00000361309 SLF1Q9BQI6 1058 aa25.3■■□□□ 1.64
CD47-202ENST00000361309 CNPY2Q9Y2B0 182 aa25.3■■□□□ 1.64
CD47-202ENST00000361309 PQBP1O60828 265 aaKnown RBP25.29■■□□□ 1.64
CD47-202ENST00000361309 SBK1Q52WX2 424 aa25.29■■□□□ 1.64
CD47-202ENST00000361309 SNRNP48Q6IEG0 339 aaKnown RBP25.29■■□□□ 1.64
CD47-202ENST00000361309 TEX13BQ9BXU2 312 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms