RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 KLHL29Q96CT2 875 aa14.46□□□□□ -0.1
SRGAP3-201ENST00000360413 SH3GL3Q99963 347 aa14.46□□□□□ -0.1
SRGAP3-201ENST00000360413 TEX12Q9BXU0 123 aa14.46□□□□□ -0.1
SRGAP3-201ENST00000360413 LMBRD1Q9NUN5 540 aa14.46□□□□□ -0.1
SRGAP3-201ENST00000360413 TEKT2Q9UIF3 430 aa14.46□□□□□ -0.1
SRGAP3-201ENST00000360413 ANGPTL2Q9UKU9 493 aa14.46□□□□□ -0.1
SRGAP3-201ENST00000360413 PPP2R2CQ9Y2T4 447 aa14.46□□□□□ -0.1
SRGAP3-201ENST00000360413 RSAD2Q8WXG1 361 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 ARHGEF35A5YM69 484 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 N4BP1O75113 896 aaKnown RBP14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 ASPHQ12797 758 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 POSTNQ15063 836 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 RIC8AQ9NPQ8 531 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 KDM3AQ9Y4C1 1321 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 CCDC169A6NNP5 214 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 RXRAP19793 462 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 GPTP24298 496 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 TMTC3Q6ZXV5 915 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 BBS5Q8N3I7 341 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 EXOC4Q96A65 974 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 KRT80Q6KB66 452 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 C2CD5Q86YS7 1000 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 MEIS3Q99687 375 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 YIPF3Q9GZM5 350 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 ANAPC5Q9UJX4 755 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 IL9RQ01113 521 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 DYNC1I2Q13409 638 aaKnown RBP14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 CEP19Q96LK0 163 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 HNRNPCP07910 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 MBIPQ9NS73 344 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 PAG1Q9NWQ8 432 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 MCM9Q9NXL9 1143 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 HYOU1Q9Y4L1 999 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 IFT122Q9HBG6 1241 aa14.45□□□□□ -0.1
SRGAP3-201ENST00000360413 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 IFNAR2P48551 515 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 GPIHBP1Q8IV16 184 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 NELFBQ8WX92 580 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 GRM8O00222 908 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 ALDH1L1O75891 902 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 PRPF6O94906 941 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 IFNA8P32881 189 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 GARSP41250 739 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 TRIM50Q86XT4 487 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 RPS6KC1Q96S38 1066 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 PI4KAP2A4QPH2 592 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 RNASELQ05823 741 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 LRMPQ12912 555 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 PRPSAP1Q14558 356 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 SPOUT1Q5T280 376 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 ZC3H18Q86VM9 953 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 ANKRD44Q8N8A2 993 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 PI4KAP1Q8N8J0 262 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 CCDC51Q96ER9 411 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 KPNA2P52292 529 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 EFHD1Q9BUP0 239 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 RTCBQ9Y3I0 505 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 ARHGEF9O43307 516 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 LLPHQ9BRT6 129 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 LOC102724159A0A0B4J2E5 919 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 ADCY8P40145 1251 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 PWP2Q15269 919 aaKnown RBP14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 PDXDC1Q6P996 788 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 INTUQ9ULD6 942 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 NCOA1Q15788 1441 aa14.44□□□□□ -0.1
SRGAP3-201ENST00000360413 SRRM1Q8IYB3 904 aaKnown RBP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 FAM81BQ96LP2 452 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 IBTKQ9P2D0 1353 aaPredicted RBP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 HNRNPH2P55795 449 aaKnown RBP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 BBOF1Q8ND07 529 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 NOP53Q9NZM5 478 aaKnown RBP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 CDKL2Q92772 493 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 RAB44Q7Z6P3 723 aaPredicted RBP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 ARMC2Q8NEN0 867 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 ATP6V0A1Q93050 837 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 RBM17Q96I25 401 aaKnown RBP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 NT5C3AQ9H0P0 336 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 POLKQ9UBT6 870 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 RRAGAQ7L523 313 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 DENND2AQ9ULE3 1009 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 ZBTB21Q9ULJ3 1066 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 CUTAO60888 179 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 PICALMQ13492 652 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 NBPF3Q9H094 633 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 HELLSQ9NRZ9 838 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 HEXIM1O94992 359 aaKnown RBP14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 ADAMTS2O95450 1211 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 CNPY4Q8N129 248 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 DONSONQ9NYP3 566 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 MYO1AQ9UBC5 1043 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 PHF8Q9UPP1 1060 aa14.43□□□□□ -0.1
SRGAP3-201ENST00000360413 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 CCDC159P0C7I6 412 aa14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 ETF1P62495 437 aaKnown RBP14.42□□□□□ -0.1
SRGAP3-201ENST00000360413 TCIRG1Q13488 830 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms