RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 FBXO28Q9NVF7 368 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 CPA4Q9UI42 421 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 SLC45A1Q9Y2W3 748 aa7.54□□□□□ -1.2
SUDS3-201ENST00000360286 FRMPD2Q68DX3 1309 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 ERICH2A1L162 156 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 TMEM232C9JQI7 657 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 WDR46O15213 610 aaKnown RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 TLR2O60603 784 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 GOLGA8HP0CJ92 632 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 HSPA8P11142 646 aaKnown RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 CASTP20810 708 aaKnown RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 RPS6KB1P23443 525 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 DSG3P32926 999 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 LBX1P52954 281 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 HERVK_113P62684 666 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 IRX3P78415 501 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 COG2Q14746 738 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 Q3C1V9 767 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 BLOC1S2Q6QNY1 142 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 C17orf99Q6UX52 265 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 Q6ZUG5 572 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 KCTD1Q719H9 257 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 RAB11FIP4Q86YS3 637 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 PNMA1Q8ND90 353 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 LPAR1Q92633 364 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 GMCL1Q96IK5 515 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 TMEM87BQ96K49 555 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 CFHR5Q9BXR6 569 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 BACH2Q9BYV9 841 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 ZSWIM6Q9HCJ5 1215 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 ZCCHC17Q9NP64 241 aaKnown RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 GPCPD1Q9NPB8 672 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 SAGE1Q9NXZ1 904 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 RBPJLQ9UBG7 517 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 PNMA3Q9UL41 463 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 ISY1Q9ULR0 285 aaKnown RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 SYNPO2Q9UMS6 1093 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 RBM19Q9Y4C8 960 aaKnown RBP7.53□□□□□ -1.2
SUDS3-201ENST00000360286 CASP8AP2Q9UKL3 1982 aa7.53□□□□□ -1.2
SUDS3-201ENST00000360286 ADGRA2Q96PE1 1338 aa7.52□□□□□ -1.2
SUDS3-201ENST00000360286 RLFQ13129 1914 aa7.52□□□□□ -1.2
SUDS3-201ENST00000360286 SPDYE16A6NNV3 312 aaPredicted RBP7.52□□□□□ -1.21
SUDS3-201ENST00000360286 GPR25O00155 361 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 CNMDO75829 334 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 FLOT1O75955 427 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 HMGB1P09429 215 aaKnown RBP7.52□□□□□ -1.21
SUDS3-201ENST00000360286 PDHBP11177 359 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 PSMA5P28066 241 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 SLC16A2P36021 539 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 SLC1A4P43007 532 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 SNAP25P60880 206 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 CAP1Q01518 475 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 SART3Q15020 963 aaKnown RBP7.52□□□□□ -1.21
SUDS3-201ENST00000360286 CCDC96Q2M329 555 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 NFXL1Q6ZNB6 911 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 RUFY3Q7L099 469 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 STAG2Q8N3U4 1231 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 ANKRD13CQ8N6S4 541 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 SMCR8Q8TEV9 937 aaPredicted RBP7.52□□□□□ -1.21
SUDS3-201ENST00000360286 DCAF4Q8WV16 495 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 KIFC2Q96AC6 838 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 ATG4CQ96DT6 458 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 PARK7Q99497 189 aaKnown RBP7.52□□□□□ -1.21
SUDS3-201ENST00000360286 LARP6Q9BRS8 491 aaKnown RBP7.52□□□□□ -1.21
SUDS3-201ENST00000360286 PAGR1Q9BTK6 254 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 MYL10Q9BUA6 226 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 UPF3BQ9BZI7 483 aaKnown RBP7.52□□□□□ -1.21
SUDS3-201ENST00000360286 TM6SF1Q9BZW5 370 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 UBA5Q9GZZ9 404 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 CPVLQ9H3G5 476 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 TXNRD2Q9NNW7 524 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 HOXC10Q9NYD6 342 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 BTBD7Q9P203 1132 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 FEM1BQ9UK73 627 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 BRPF3Q9ULD4 1205 aa7.52□□□□□ -1.21
SUDS3-201ENST00000360286 CCDC69A6NI79 296 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 SNHG28P0DPA3 235 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 BCRP11274 1271 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 RXRAP19793 462 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 CTGFP29279 349 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 LIFRP42702 1097 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 CTCFP49711 727 aaPredicted RBP7.51□□□□□ -1.21
SUDS3-201ENST00000360286 ANAPC15P60006 121 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 SP3Q02447 781 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 ZNF543Q08ER8 600 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 APOBRQ0VD83 1088 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 IKQ13123 557 aaPredicted RBP7.51□□□□□ -1.21
SUDS3-201ENST00000360286 CATIPQ7Z7H3 387 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 CCDC144CPQ8IYA2 1237 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 TMTC2Q8N394 836 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 PRPF38AQ8NAV1 312 aaKnown RBP7.51□□□□□ -1.21
SUDS3-201ENST00000360286 CD99L2Q8TCZ2 262 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 CHURC1Q8WUH1 139 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 NUP133Q8WUM0 1156 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 ZNF296Q8WUU4 475 aaPredicted RBP7.51□□□□□ -1.21
SUDS3-201ENST00000360286 BRF1Q92994 677 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 KIF2CQ99661 725 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 SLF1Q9BQI6 1058 aa7.51□□□□□ -1.21
SUDS3-201ENST00000360286 MTA3Q9BTC8 594 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms