RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 DAGLBQ8NCG7 672 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 RPGRQ92834 1020 aaKnown RBP29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 ZNF287Q9HBT7 754 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 CD44P16070 742 aaKnown RBP29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 ETF1P62495 437 aaKnown RBP29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 GRIK5Q16478 980 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 GALNT17Q6IS24 598 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 SLC51AQ86UW1 340 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 ZNF444Q8N0Y2 327 aaPredicted RBP29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 STAG2Q8N3U4 1231 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 CCDC148Q8NFR7 591 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 TGFBRAP1Q8WUH2 860 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 ARID3AQ99856 593 aa29.93■■■□□ 2.38
CUEDC1-201ENST00000360238 UBAP1LF5GYI3 381 aa29.92■■■□□ 2.38
CUEDC1-201ENST00000360238 STX10O60499 249 aa29.92■■■□□ 2.38
CUEDC1-201ENST00000360238 CRY2Q49AN0 593 aa29.92■■■□□ 2.38
CUEDC1-201ENST00000360238 CDKAL1Q5VV42 579 aa29.92■■■□□ 2.38
CUEDC1-201ENST00000360238 TC2NQ8N9U0 490 aa29.92■■■□□ 2.38
CUEDC1-201ENST00000360238 BAG1Q99933 345 aaPredicted RBP29.92■■■□□ 2.38
CUEDC1-201ENST00000360238 IL17AQ16552 155 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 FAM205AQ6ZU69 1335 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 FOCADQ5VW36 1801 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 PPP1R3GB7ZBB8 358 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 M0R2N6 131 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 ADAMTS3O15072 1205 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 CASP1P29466 404 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 GPSM2P81274 684 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 GOLGA8FQ08AF8 430 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 GOLGA8DPQ0D2H9 430 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 PTPN21Q16825 1174 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 APTXQ7Z2E3 356 aaKnown RBP29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 HOMER1Q86YM7 354 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 C4orf32Q8N8J7 132 aa29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 GPKOWQ92917 476 aaPredicted RBP eCLIP29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 BCL11BQ9C0K0 894 aaPredicted RBP29.91■■■□□ 2.38
CUEDC1-201ENST00000360238 MYH1P12882 1939 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 USP17L3A6NCW0 530 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 USP17L4A6NCW7 530 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 GTPBP6O43824 516 aaPredicted RBP29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 ATP2B4P23634 1241 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 USP17L1Q7RTZ2 530 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 CTAGE1Q96RT6 745 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 LZTS2Q9BRK4 669 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 RASA1P20936 1047 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 REXO1L1PQ8IX06 675 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 SNED1Q8TER0 1413 aa29.9■■■□□ 2.38
CUEDC1-201ENST00000360238 GOLGA6L9A6NEM1 432 aa29.89■■■□□ 2.38
CUEDC1-201ENST00000360238 IL1R1P14778 569 aa29.89■■■□□ 2.38
CUEDC1-201ENST00000360238 TXLNAP40222 546 aa29.89■■■□□ 2.38
CUEDC1-201ENST00000360238 NAA30Q147X3 362 aaPredicted RBP29.89■■■□□ 2.38
CUEDC1-201ENST00000360238 KLHL10Q6JEL2 608 aa29.89■■■□□ 2.38
CUEDC1-201ENST00000360238 CD209Q9NNX6 404 aa29.89■■■□□ 2.38
CUEDC1-201ENST00000360238 CCDC93Q567U6 631 aa29.88■■■□□ 2.37
CUEDC1-201ENST00000360238 PALM3A6NDB9 673 aaPredicted RBP29.88■■■□□ 2.37
CUEDC1-201ENST00000360238 UFL1O94874 794 aa29.88■■■□□ 2.37
CUEDC1-201ENST00000360238 BTDP43251 543 aa29.88■■■□□ 2.37
CUEDC1-201ENST00000360238 MAPKAPK5Q8IW41 473 aa29.88■■■□□ 2.37
CUEDC1-201ENST00000360238 GPR101Q96P66 508 aaPredicted RBP29.88■■■□□ 2.37
CUEDC1-201ENST00000360238 TMEM47Q9BQJ4 181 aa29.88■■■□□ 2.37
CUEDC1-201ENST00000360238 LRRC37AA6NMS7 1700 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 GPR75-ASB3A0A0A6YYF3 556 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 CCDC194A0A1B0GVG4 234 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 PLCG2P16885 1265 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 ST5P78524 1137 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 WWC2Q6AWC2 1192 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 TYW1BQ6NUM6 668 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 TRIM65Q6PJ69 517 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 SLC44A5Q8NCS7 719 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 BARHL2Q9NY43 387 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 PPP2R2CQ9Y2T4 447 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 C16orf86Q6ZW13 317 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 RMND1Q9NWS8 449 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 GGA1Q9UJY5 639 aa29.87■■■□□ 2.37
CUEDC1-201ENST00000360238 SLC35G1Q2M3R5 365 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 GJD4Q96KN9 370 aaPredicted RBP29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 FEZ1Q99689 392 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 ADD3Q9UEY8 706 aaKnown RBP29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 LTBP1Q14766 1721 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 STXBP3O00186 592 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 CYTH3O43739 400 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 STX17P56962 302 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 SMYD4Q8IYR2 804 aaPredicted RBP29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 RBM17Q96I25 401 aaKnown RBP29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 PCDHA6Q9UN73 950 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 STX8Q9UNK0 236 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 PCDHA8Q9Y5H6 950 aa29.86■■■□□ 2.37
CUEDC1-201ENST00000360238 PBX1P40424 430 aa29.85■■■□□ 2.37
CUEDC1-201ENST00000360238 PANX2Q96RD6 677 aa29.85■■■□□ 2.37
CUEDC1-201ENST00000360238 MTRQ99707 1265 aa29.85■■■□□ 2.37
CUEDC1-201ENST00000360238 SPZ1Q9BXG8 430 aa29.85■■■□□ 2.37
CUEDC1-201ENST00000360238 LRRC4BQ9NT99 713 aa29.85■■■□□ 2.37
CUEDC1-201ENST00000360238 SAP30BPQ9UHR5 308 aaKnown RBP29.85■■■□□ 2.37
CUEDC1-201ENST00000360238 ADKP55263 362 aaKnown RBP29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 CTNND2Q9UQB3 1225 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 LAD1O00515 517 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 FILIP1LQ4L180 1135 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 HEATR3Q7Z4Q2 680 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 SLF2Q8IX21 1173 aa29.84■■■□□ 2.37
CUEDC1-201ENST00000360238 TEX11Q8IYF3 940 aa29.84■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms