RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 C6orf50Q9HD87 102 aa10.54□□□□□ -0.72
GTF3C2-202ENST00000359541 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
GTF3C2-202ENST00000359541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.54□□□□□ -0.726e-7■□□□□ 10.3
GTF3C2-202ENST00000359541 WTIPA6NIX2 430 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 AKR1B15C9JRZ8 316 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 ANKS1AQ92625 1134 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 PARP1P09874 1014 aaKnown RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 NFIXQ14938 502 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 C15orf52Q6ZUT6 534 aaKnown RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 TMC4Q7Z404 712 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 ZNF397Q8NF99 534 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 SH3RF3Q8TEJ3 882 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 ZNF384Q8TF68 577 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 DPF2Q92785 391 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 RRP36Q96EU6 259 aaKnown RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 DNAI1Q9UI46 699 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 LTBP4Q8N2S1 1624 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 BBOX1O75936 387 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 MYL1P05976 194 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 NCBP1Q09161 790 aaKnown RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 SEMA3FQ13275 785 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 KRT25Q7Z3Z0 450 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 CREBRFQ8IUR6 639 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 CNGA4Q8IV77 575 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 MAPKAPK5Q8IW41 473 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 SPATA20Q8TB22 786 aa10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 MAGEC2Q9UBF1 373 aaPredicted RBP10.53□□□□□ -0.72
GTF3C2-202ENST00000359541 ZNF18P17022 549 aa10.52□□□□□ -0.72
GTF3C2-202ENST00000359541 ZSCAN20P17040 1043 aaPredicted RBP10.52□□□□□ -0.72
GTF3C2-202ENST00000359541 BTDP43251 543 aa10.52□□□□□ -0.72
GTF3C2-202ENST00000359541 NAPAP54920 295 aa10.52□□□□□ -0.72
GTF3C2-202ENST00000359541 PAK1Q13153 545 aa10.52□□□□□ -0.72
GTF3C2-202ENST00000359541 TRIM14Q14142 442 aa10.52□□□□□ -0.72
GTF3C2-202ENST00000359541 USP49Q70CQ1 688 aa10.52□□□□□ -0.72
GTF3C2-202ENST00000359541 CCDC175P0C221 793 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 CASQ1P31415 396 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 STX17P56962 302 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 DPYDQ12882 1025 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 WWC2Q6AWC2 1192 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 CCDC51Q96ER9 411 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 EYA3Q99504 573 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 C6orf229H3BNL8 230 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 FMR1Q06787 632 aaKnown RBP eCLIP10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 SMIM5Q71RC9 77 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 IGSF22Q8N9C0 903 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 UBXN4Q92575 508 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 MAGEF1Q9HAY2 307 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 CTNND2Q9UQB3 1225 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.73
GTF3C2-202ENST00000359541 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 N4BP3O15049 544 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 URI1O94763 535 aaPredicted RBP10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 PPP1R2P41236 205 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 DIXDC1Q155Q3 683 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 SH3RF1Q7Z6J0 888 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 TXNRD3Q86VQ6 643 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 HSD3B7Q9H2F3 369 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 CD209Q9NNX6 404 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 SAMSN1Q9NSI8 373 aaKnown RBP10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 SAP30BPQ9UHR5 308 aaKnown RBP10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 SMIM22K7EJ46 135 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 BMP6P22004 513 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 TM4SF1P30408 202 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 AMPD3Q01432 767 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 DAGLBQ8NCG7 672 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 DYNLL2Q96FJ2 89 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 CUEDC2Q9H467 287 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 PPP2R2CQ9Y2T4 447 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 ECM29Q5VYK3 1845 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 MAST2Q6P0Q8 1798 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 A0A1B0GTH6 734 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 KLRF2D3W0D1 207 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 hCG_1984214I3L0E3 225 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 MFSD14BQ5SR56 506 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 ZNF713Q8N859 430 aaPredicted RBP10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 AK8Q96MA6 479 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 PANX2Q96RD6 677 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 RWDD2AQ9UIY3 292 aa10.51□□□□□ -0.73
GTF3C2-202ENST00000359541 PSMA7O14818 248 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 GNG11P61952 73 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 NONOQ15233 471 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■□□□□ 9.3
GTF3C2-202ENST00000359541 EARS2Q5JPH6 523 aaKnown RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 ZNF658Q5TYW1 1059 aaPredicted RBP10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 RCSD1Q6JBY9 416 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 RAB34Q9BZG1 259 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 BARHL2Q9NY43 387 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 MYH6P13533 1939 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 SERPINB2P05120 415 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 PRR5LQ6MZQ0 368 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 SPZ1Q9BXG8 430 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 MYH2Q9UKX2 1941 aa10.5□□□□□ -0.73
GTF3C2-202ENST00000359541 USP17L3A6NCW0 530 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms