RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 HMGB1P1B2RPK0 211 aaPredicted RBP12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 GUCY2FP51841 1108 aa12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 TEFQ10587 303 aa12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 IFT81Q8WYA0 676 aa12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 MMADHCQ9H3L0 296 aaPredicted RBP12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 STIM2Q9P246 746 aa12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 PA2G4Q9UQ80 394 aaKnown RBP12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 AGLP35573 1532 aa12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 LMTK2Q8IWU2 1503 aa12.69□□□□□ -0.38
SEPSECS-201ENST00000358971 N4BP3O15049 544 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 TMOD1P28289 359 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 MAP3K12Q12852 859 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 ITGB3BPQ13352 177 aaPredicted RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 SYCP3Q8IZU3 236 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 KDM6AO15550 1401 aaPredicted RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 PPIP5K2O43314 1243 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 MYL1P05976 194 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 RIPK1Q13546 671 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 TRIM42Q8IWZ5 723 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 IQCKQ8N0W5 287 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 SRRM3A6NNA2 597 aaPredicted RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 PHF20L1A8MW92 1017 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 KIF28PB7ZC32 967 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 GHRP10912 638 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 PDIA3P30101 505 aaKnown RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 POSTNQ15063 836 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 ACBD5Q5T8D3 534 aaPredicted RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 MMGT1Q8N4V1 131 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 CAVIN3Q969G5 261 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 MED15Q96RN5 788 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 REXO2Q9Y3B8 237 aaKnown RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 MED23Q9ULK4 1368 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 ATP7BP35670 1465 aa12.68□□□□□ -0.38
SEPSECS-201ENST00000358971 SALL1Q9NSC2 1324 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 MACROD2A1Z1Q3 448 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 TRAPPC3O43617 180 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 KRT86O43790 486 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 TRIM37O94972 964 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 OATP04181 439 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 PAK2Q13177 524 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ENOX2Q16206 610 aaKnown RBP12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ANKRD20A2Q5SQ80 823 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ANKRD20A1Q5TYW2 823 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ANKRD20A3Q5VUR7 823 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 DNAJC14Q6Y2X3 702 aaPredicted RBP12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 CNKSR1Q969H4 720 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 EDC3Q96F86 508 aaKnown RBP12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 NFU1Q9UMS0 254 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ARHGEF10O15013 1369 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 RNF225M0QZC1 329 aaPredicted RBP12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 LGR5O75473 907 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 HMGB1P09429 215 aaKnown RBP12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 C8orf74Q6P047 294 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 PSMB7Q99436 277 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 SNRKQ9NRH2 765 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ANKRD26Q9UPS8 1709 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 EMC10Q5UCC4 262 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 GRAMD1CQ8IYS0 662 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 SPATA4Q8NEY3 305 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 CHMP7Q8WUX9 453 aaPredicted RBP12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 ZFAND2BQ8WV99 257 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
SEPSECS-201ENST00000358971 CCT8L1PA6NM43 557 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 CREB3O43889 395 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 PBX1P40424 430 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 PLCD1P51178 756 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 SPICE1Q8N0Z3 855 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 AFAP1Q8N556 730 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 NDST4Q9H3R1 872 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 ATP6V1G1O75348 118 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 FAM153BP0C7A2 387 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 CCND1P24385 295 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 ZBED6P86452 979 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 BYSLQ13895 437 aaKnown RBP12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 FAM153CQ494X1 144 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 RESP18Q5W5W9 173 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 APTXQ7Z2E3 356 aaKnown RBP12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 ERICH1Q86X53 443 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 RAB11FIP4Q86YS3 637 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 STK11IPQ8N1F8 1099 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 DYDC1Q8WWB3 177 aa12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 NAF1Q96HR8 494 aaKnown RBP12.66□□□□□ -0.38
SEPSECS-201ENST00000358971 MMTAG2Q9BU76 263 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms