RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TMEM87AQ8NBN3 555 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.21■□□□□ 0.03
VCP-201ENST00000358901 MRPL44Q9H9J2 332 aaKnown RBP15.21■□□□□ 0.03
VCP-201ENST00000358901 ATP1A3P13637 1013 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 PTPROQ16827 1216 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 SLC35F6Q8N357 371 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 RDH13Q8NBN7 331 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 TSNARE1Q96NA8 513 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 NUCKS1Q9H1E3 243 aaKnown RBP15.21■□□□□ 0.03
VCP-201ENST00000358901 SLC39A2Q9NP94 309 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.21■□□□□ 0.033e-6■■□□□ 14.2
VCP-201ENST00000358901 ASAP1Q9ULH1 1129 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 ERCC5P28715 1186 aaPredicted RBP15.21■□□□□ 0.02
VCP-201ENST00000358901 COPB1P53618 953 aaKnown RBP15.21■□□□□ 0.02
VCP-201ENST00000358901 MYOCDQ8IZQ8 938 aa15.21■□□□□ 0.02
VCP-201ENST00000358901 UBL4BQ8N7F7 174 aa15.21■□□□□ 0.02
VCP-201ENST00000358901 MRRFQ96E11 262 aaKnown RBP15.21■□□□□ 0.02
VCP-201ENST00000358901 ASIC3Q9UHC3 531 aa15.21■□□□□ 0.02
VCP-201ENST00000358901 MKRN1Q9UHC7 482 aaKnown RBP15.21■□□□□ 0.02
VCP-201ENST00000358901 OR52Z1P0C646 297 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 CHRNDQ07001 517 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 CERS3Q8IU89 383 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 PPM1EQ8WY54 764 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 SMC6Q96SB8 1091 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 FOXP1Q9H334 677 aaPredicted RBP15.2■□□□□ 0.02
VCP-201ENST00000358901 GJB4Q9NTQ9 266 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 MAP3K15Q6ZN16 1313 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
VCP-201ENST00000358901 CFBP00751 764 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 ARHGAP44Q17R89 818 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 PDE11AQ9HCR9 933 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 DDX39AO00148 427 aaKnown RBP15.2■□□□□ 0.02
VCP-201ENST00000358901 ENC1O14682 589 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 WDR44Q5JSH3 913 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 KIFAP3Q92845 792 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 NEO1Q92859 1461 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 BUB1O43683 1085 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 SRGAP1Q7Z6B7 1085 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 CEP63Q96MT8 703 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 LSM14BQ9BX40 385 aaKnown RBP15.2■□□□□ 0.02
VCP-201ENST00000358901 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 PCDHA12Q9UN75 941 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 PARP3Q9Y6F1 533 aa15.2■□□□□ 0.02
VCP-201ENST00000358901 SMTNP53814 917 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 MAP3K9P80192 1104 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 MFSD14BQ5SR56 506 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 NEK8Q86SG6 692 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 KIF2CQ99661 725 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 RNF26Q9BY78 433 aaPredicted RBP15.19■□□□□ 0.02
VCP-201ENST00000358901 SLAIN2Q9P270 581 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 HYOU1Q9Y4L1 999 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 COMMD10Q9Y6G5 202 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 CDK12Q9NYV4 1490 aaPredicted RBP15.19■□□□□ 0.02
VCP-201ENST00000358901 TARBP1Q13395 1621 aaKnown RBP15.19■□□□□ 0.02
VCP-201ENST00000358901 CDC25AP30304 524 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 SLFNL1Q499Z3 407 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 INTS8Q75QN2 995 aaKnown RBP15.19■□□□□ 0.02
VCP-201ENST00000358901 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 KCNK3O14649 394 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 PRKAB2O43741 272 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 TCP1P17987 556 aaKnown RBP15.19■□□□□ 0.02
VCP-201ENST00000358901 ADD2P35612 726 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 IQCDQ96DY2 449 aa15.19■□□□□ 0.02
VCP-201ENST00000358901 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
VCP-201ENST00000358901 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
VCP-201ENST00000358901 CPSF1Q10570 1443 aaKnown RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 ABCB4P21439 1286 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 UAP1Q16222 522 aaPredicted RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 GPBP1Q86WP2 473 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 ZSWIM5Q9P217 1185 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 ZBTB1Q9Y2K1 713 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 XRCC5P13010 732 aaKnown RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 EPHA10Q5JZY3 1008 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 PNMA8AQ86V59 439 aaPredicted RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 CCDC105Q8IYK2 499 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 CPXCR1Q8N123 301 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 RASGRP4Q8TDF6 673 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 TUBGCP2Q9BSJ2 902 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 ARMCX3Q9UH62 379 aaPredicted RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 MLH3Q9UHC1 1453 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 MYO5CQ9NQX4 1742 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 E7EVH7 732 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 IFNAR1P17181 557 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 ALDH3A1P30838 453 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 STAT1P42224 750 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 ATP1A2P50993 1020 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 LACTBP83111 547 aaPredicted RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 PPANQ9NQ55 473 aaKnown RBP15.18■□□□□ 0.02
VCP-201ENST00000358901 SPTLC3Q9NUV7 552 aa15.18■□□□□ 0.02
VCP-201ENST00000358901 ATP2A2P16615 1042 aaKnown RBP15.17■□□□□ 0.02
VCP-201ENST00000358901 LONP1P36776 959 aaKnown RBP15.17■□□□□ 0.02
VCP-201ENST00000358901 GNGT1P63211 74 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 TOB2Q14106 344 aaPredicted RBP15.17■□□□□ 0.02
VCP-201ENST00000358901 U2AF1L4Q8WU68 220 aaKnown RBP15.17■□□□□ 0.02
VCP-201ENST00000358901 PDLIM2Q96JY6 352 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 FMNL1O95466 1100 aaPredicted RBP15.17■□□□□ 0.02
VCP-201ENST00000358901 SLFN14P0C7P3 912 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 GTF2IP78347 998 aa15.17■□□□□ 0.02
VCP-201ENST00000358901 RBL2Q08999 1139 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms