RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 DRG2P55039 364 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ROPN1BQ9BZX4 212 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 EHMT1Q9H9B1 1298 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ROPN1Q9HAT0 212 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 PCDHA5Q9Y5H7 936 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 EIF3HO15372 352 aaKnown RBP eCLIP4.55□□□□□ -1.683e-6■■■■□ 24.3
SYNE2-204ENST00000358025 KIRREL3Q8IZU9 778 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 HPS3Q969F9 1004 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ABCB11O95342 1321 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ADCY9O60503 1353 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 MRPL12P52815 198 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 NR1I3Q14994 352 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 LIN7AO14910 233 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 GTPBP6O43824 516 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 SERPING1P05155 500 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 LONP1P36776 959 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 EXOSC10Q01780 885 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 MMGT1Q8N4V1 131 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 STAMBPL1Q96FJ0 436 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 UTYO14607 1347 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 RSRC2Q7L4I2 434 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 SGMS1Q86VZ5 419 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC13Q8IYE1 715 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 PGBD1Q96JS3 809 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CENPKQ9BS16 269 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 SLITRK6Q9H5Y7 841 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 SYNRGQ9UMZ2 1314 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 RABEP2Q9H5N1 569 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ERVK-7P63135 1459 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CD109Q6YHK3 1445 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 RIPK1Q13546 671 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 BEND6Q5SZJ8 279 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 NEK11Q8NG66 645 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 KLC4Q9NSK0 619 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 FAM53CQ9NYF3 392 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 GCKP35557 465 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 LRRC63Q05C16 580 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 KRT25Q7Z3Z0 450 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CAPN11Q9UMQ6 739 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 BCRP11274 1271 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 HNRNPH1P31943 449 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 HS2ST1Q7LGA3 356 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 NUP133Q8WUM0 1156 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ADGRG1Q9Y653 693 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 PCK1P35558 622 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 NOP2P46087 812 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ITIH4Q14624 930 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 DCAF5Q96JK2 942 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 DCTN3O75935 186 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 GHRP10912 638 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 USP14P54578 494 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 FAM187AA6NFU0 413 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 F6X3S4 739 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 BAG3O95817 575 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ISM2Q6H9L7 571 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF710Q8N1W2 664 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 STMN2Q93045 179 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 SPAG5Q96R06 1193 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 RGS16O15492 202 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 MARCKSP29966 332 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 IRAK1P51617 712 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF365Q70YC5 407 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 DRC3Q9H069 523 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 FAM96AQ9H5X1 160 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 SCOCQ9UIL1 159 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 LSP1P33241 339 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 NT5DC1Q5TFE4 455 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 MPHOSPH6Q99547 160 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 COL15A1P39059 1388 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 MMP14P50281 582 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 EIF4A1P60842 406 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 DHX40Q8IX18 779 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 DRC1Q96MC2 740 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CAPN7Q9Y6W3 813 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 FAM169AQ9Y6X4 670 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 A0A1W2PQJ5 194 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ZBTB16Q05516 673 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 WTAPQ15007 396 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 GRK7Q8WTQ7 553 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 SYNCQ9H7C4 482 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 PUF60Q9UHX1 559 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF652Q9Y2D9 606 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 PEX19P40855 299 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC6Q16204 474 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 PAPD7Q5XG87 772 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ANKRD35Q8N283 1001 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 DMRT2Q9Y5R5 561 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 N4BP1O75113 896 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CCZ1BP86790 482 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CCZ1P86791 482 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 MMADHCQ9H3L0 296 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ARHGAP10A1A4S6 786 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 MAP4K4O95819 1239 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF148Q9UQR1 794 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 RASSF10A6NK89 507 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 TRIM28Q13263 835 aaKnown RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 CCNI2Q6ZMN8 369 aaPredicted RBP4.54□□□□□ -1.68
SYNE2-204ENST00000358025 MAP3K14Q99558 947 aa4.54□□□□□ -1.68
SYNE2-204ENST00000358025 GUCA1BQ9UMX6 200 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms