RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 PCDHB6Q9Y5E3 794 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 OPA1O60313 960 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 LIFRP42702 1097 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 CTAGE1Q96RT6 745 aa11.19□□□□□ -0.62
RNF40-202ENST00000357890 CASP1P29466 404 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 NCAPHQ15003 741 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 RESP18Q5W5W9 173 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 B4GALNT4Q76KP1 1039 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 CCDC47Q96A33 483 aaKnown RBP11.18□□□□□ -0.62
RNF40-202ENST00000357890 PPANQ9NQ55 473 aaKnown RBP11.18□□□□□ -0.62
RNF40-202ENST00000357890 SYNRGQ9UMZ2 1314 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 MCM7P33993 719 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 PAFAH1B1P43034 410 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 RNASE9P60153 205 aaKnown RBP11.18□□□□□ -0.62
RNF40-202ENST00000357890 IFT88Q13099 833 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 PDCLQ13371 301 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 BIRC2Q13490 618 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 TBC1D31Q96DN5 1066 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 CSRNP2Q9H175 543 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 BLZF1Q9H2G9 400 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 NEDD4P46934 1319 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 HNRNPH1P31943 449 aaKnown RBP11.18□□□□□ -0.62
RNF40-202ENST00000357890 KRT9P35527 623 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 GGCXP38435 758 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 CKAP4Q07065 602 aaKnown RBP11.18□□□□□ -0.62
RNF40-202ENST00000357890 CCDC96Q2M329 555 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 BICDL1Q6ZP65 573 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 ZNF512BQ96KM6 892 aaPredicted RBP11.18□□□□□ -0.62
RNF40-202ENST00000357890 MRPL44Q9H9J2 332 aaKnown RBP11.18□□□□□ -0.62
RNF40-202ENST00000357890 BAIAP2L1Q9UHR4 511 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 CTNND2Q9UQB3 1225 aa11.18□□□□□ -0.62
RNF40-202ENST00000357890 MYO1BO43795 1136 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 SRGAP2O75044 1071 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 IDEP14735 1019 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 IFNAR1P17181 557 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 CASP14P31944 242 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 KRT2P35908 639 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 SPA17Q15506 151 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 CCDC93Q567U6 631 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 ZNF654Q8IZM8 581 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 FANCBQ8NB91 859 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 SDR42E1Q8WUS8 393 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
RNF40-202ENST00000357890 ZNF652Q9Y2D9 606 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 UBN2Q6ZU65 1347 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 KIF4AO95239 1232 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 GUCY1A2P33402 732 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 IL6STP40189 918 aaPredicted RBP11.17□□□□□ -0.62
RNF40-202ENST00000357890 PDE4BQ07343 736 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 NEDD9Q14511 834 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 KIRREL3Q8IZU9 778 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 CCDC113Q9H0I3 377 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 MAGEB6P1A0A0J9YX57 407 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 E7EVH7 732 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 MYO1FO00160 1098 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 MARCH6O60337 910 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 FMNL1O95466 1100 aaPredicted RBP11.17□□□□□ -0.62
RNF40-202ENST00000357890 MMP1P03956 469 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 RBL2Q08999 1139 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 TRIM65Q6PJ69 517 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 CNGA4Q8IV77 575 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 EPSTI1Q96J88 318 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 PLIN2Q99541 437 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 PSD3Q9NYI0 1048 aa11.17□□□□□ -0.62
RNF40-202ENST00000357890 ERVV-1B6SEH8 477 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 TUBBP07437 444 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 SCP2P22307 547 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 UBXN1Q04323 297 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 RASGRF1Q13972 1273 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 ALX1Q15699 326 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 CFAP58Q5T655 872 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 MSL1Q68DK7 614 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 PNMA8AQ86V59 439 aaPredicted RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 SGMS1Q86VZ5 419 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 LY9Q9HBG7 655 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 TAB2Q9NYJ8 693 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 TTF2Q9UNY4 1162 aaKnown RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 BCAMP50895 628 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 GRIN1Q05586 938 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 PARP10Q53GL7 1025 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 FCHSD1Q86WN1 690 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 IQUBQ8NA54 791 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 NOA1Q8NC60 698 aaKnown RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 EEF2KMTQ96G04 330 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 TUBE1Q9UJT0 475 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 HGSO14964 777 aaPredicted RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 CYP19A1P11511 503 aaPredicted RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 TRIM21P19474 475 aaKnown RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 ARID4AP29374 1257 aaPredicted RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 WHAMMP3Q1A5X7 153 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 BEND6Q5SZJ8 279 aaPredicted RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 ENOX1Q8TC92 643 aaKnown RBP11.16□□□□□ -0.62
RNF40-202ENST00000357890 IGDCC4Q8TDY8 1250 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 MICAL1Q8TDZ2 1067 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 NGLY1Q96IV0 654 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 KAT14Q9H8E8 782 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 CD248Q9HCU0 757 aa11.16□□□□□ -0.62
RNF40-202ENST00000357890 ZPR1O75312 459 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms