RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 TIAM2Q8IVF5 1701 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 ZBTB43O43298 467 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 PPFIA3O75145 1194 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 MMP1P03956 469 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 IFNAR1P17181 557 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 R3HDM1Q15032 1099 aaKnown RBP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 PAPD7Q5XG87 772 aaKnown RBP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 SPATS2Q86XZ4 545 aaKnown RBP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 ZSWIM4Q9H7M6 989 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 AATFQ9NY61 560 aaKnown RBP eCLIP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 UBN2Q6ZU65 1347 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 FOXN1O15353 648 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 BMP15O95972 392 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 GYPCP04921 128 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 RHOXF2BP0C7M4 288 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 GYS1P13807 737 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 GSCP56915 257 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 SSRP1Q08945 709 aaKnown RBP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 RHOXF2Q9BQY4 288 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 PYM1Q9BRP8 204 aaKnown RBP12.01□□□□□ -0.49
CAPN3-205ENST00000357568 ABHD10Q9NUJ1 306 aa12.01□□□□□ -0.49
CAPN3-205ENST00000357568 POLR2DO15514 142 aaKnown RBP12□□□□□ -0.49
CAPN3-205ENST00000357568 TEX33O43247 280 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 ITIH3Q06033 890 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 ALX1Q15699 326 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 IQCEQ6IPM2 695 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 DDX24Q9GZR7 859 aaKnown RBP eCLIP12□□□□□ -0.49
CAPN3-205ENST00000357568 PPFIA1Q13136 1202 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
CAPN3-205ENST00000357568 TCIRG1Q13488 830 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 STIM1Q13586 685 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 TRMT44Q8IYL2 757 aaKnown RBP12□□□□□ -0.49
CAPN3-205ENST00000357568 SUGCTQ9HAC7 445 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
CAPN3-205ENST00000357568 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
CAPN3-205ENST00000357568 ANO9A1A5B4 782 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 GOLGA8AA7E2F4 631 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 CASP14P31944 242 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-205ENST00000357568 HAND2P61296 217 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 TIMM10P62072 90 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 WASHC4Q2M389 1173 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 NOA1Q8NC60 698 aaKnown RBP11.99□□□□□ -0.49
CAPN3-205ENST00000357568 FAM76AQ8TAV0 307 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 MTFR1LQ9H019 292 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 A1CFQ9NQ94 594 aaKnown RBP11.99□□□□□ -0.49
CAPN3-205ENST00000357568 CWC25Q9NXE8 425 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-205ENST00000357568 CEP126Q9P2H0 1117 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 GPAA1O43292 621 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 RANBP6O60518 1105 aaKnown RBP11.99□□□□□ -0.49
CAPN3-205ENST00000357568 PARP10Q53GL7 1025 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 SMIM5Q71RC9 77 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.99□□□□□ -0.49
CAPN3-205ENST00000357568 ZNF34Q8IZ26 560 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 ANKRD20A12PQ8NF67 263 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 IGDCC4Q8TDY8 1250 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 AIFM3Q96NN9 605 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 ISCA1Q9BUE6 129 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 NBPF3Q9H094 633 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 ZBTB3Q9H5J0 574 aa11.99□□□□□ -0.49
CAPN3-205ENST00000357568 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-205ENST00000357568 GOLGA8KD6RF30 607 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 EPB41P11171 864 aaKnown RBP11.98□□□□□ -0.49
CAPN3-205ENST00000357568 TM4SF1P30408 202 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 ERVK-24P63145 666 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 SEMA3FQ13275 785 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 HLFQ16534 295 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 PTPN21Q16825 1174 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 ZNF572Q7Z3I7 529 aaPredicted RBP11.98□□□□□ -0.49
CAPN3-205ENST00000357568 CDC5LQ99459 802 aaKnown RBP11.98□□□□□ -0.49
CAPN3-205ENST00000357568 EBAG9O00559 213 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 FXR1P51114 621 aaKnown RBP eCLIP11.98□□□□□ -0.49
CAPN3-205ENST00000357568 CRACR2AQ9BSW2 395 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 LY9Q9HBG7 655 aa11.98□□□□□ -0.49
CAPN3-205ENST00000357568 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 ERLIN2O94905 339 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 DPYDQ12882 1025 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 TTF1Q15361 905 aaPredicted RBP11.97□□□□□ -0.49
CAPN3-205ENST00000357568 UBE3CQ15386 1083 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 AMOTL1Q8IY63 956 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 DIS3L2Q8IYB7 885 aaKnown RBP11.97□□□□□ -0.49
CAPN3-205ENST00000357568 TRIM22Q8IYM9 498 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 FERMT2Q96AC1 680 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 PAGR1Q9BTK6 254 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 RWDD2AQ9UIY3 292 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 A0A1W2PQC6 194 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 SKOR1P84550 965 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 PPP2R5BQ15173 497 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 WWC2Q6AWC2 1192 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 SH3GL2Q99962 352 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 CNNM2Q9H8M5 875 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 SAR1BQ9Y6B6 198 aa11.97□□□□□ -0.49
CAPN3-205ENST00000357568 ZEB2O60315 1214 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms